Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1253 ATGGGTTCTTTGGGCACAATACAGAAGCCACATGCCGTGTGCATCCCATACCCAGCACAAGGCCACATAAACCCGATGCTCAAACTAGCAAAGCTCCTTCACTTCAGAGGCTTCCACATCACCTTTGTCAACACTGAATACAACCACAAACGCATCCTCAAATCCAGAGGCCCTGATTCCCTCAACGGCCTGCCCTCATTCCATTTCACAACCATCCCTGACGGTCTGCCTGAGCCTGAGGTGGATGCCACACAGGATATTCCTTCCCTGTGTGAGTCCACAAGAAGGACATGCTTGCCTCACTCCAAGAACCTCATTTCAAAGCTCAATGATTCCCCTGATGTGCCTCCTGTTACTTGCATAGTCTCTGATGGTGTCATGAGTTTCACTGTTGATGCTGCTGAGGAACTTGGGATCCCTGAGGTGCTGTTCTGGACAACAAGTGCTTGTGGGTTCATGTGCTACACGCAATATCGTAGCTTCATTGAAAAAGGCATAACACCCCTCAAAGGTAAATTGATTTTCTTTCTTTAA 534 0.4813 MGSLGTIQKPHAVCIPYPAQGHINPMLKLAKLLHFRGFHITFVNTEYNHKRILKSRGPDSLNGLPSFHFTTIPDGLPEPEVDATQDIPSLCESTRRTCLPHSKNLISKLNDSPDVPPVTCIVSDGVMSFTVDAAEELGIPEVLFWTTSACGFMCYTQYRSFIEKGITPLKGKLIFFL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1253 177 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 172 - -
Dod08g1253 177 Gene3D Glycogen Phosphorylase B; 6 176 - -
Dod08g1253 177 PANTHER - 7 170 - -
Dod08g1253 177 PANTHER EG:EG0003.4 PROTEIN-RELATED 7 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1253 Dod-Chr8 17479528 17480600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1253 1 172 Glycosyltransferase AT1G22360 67.442 2.74e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1253 - - gmx:100790111 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1253 08 17479528 17480600 Dod08g1253 08 17479528 17480600 ECH