Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1247 ATGGCTGTCTCCACTTCCAACTCCCTCATCCCCACAAAAACCTTGATGCCCCCAACAAACACTCTCACCCCTCCCACAAAACTATACCAATCCACTAACCCCGCCAGGCCCGGGCTCAGGCCAATTGTAGCGGTCCACGCCGCCGAGCCCGCCAAGAACCCGGTGGTCTCCGAGAAGCCAGCCAAGCCGCAGCCCGCACCCGCTGCCCCGGCCCGAAATGCGGGCCAGGGGAAGTGGGCCCTGGACAGCTGGAAGTCGAAGCGGGCCCTGCAGCTGCCGGAGTACCCGAACCAGGAGGAGCTGGAGTCGGTGCTGCGGACACTTGACGCGTTCCCGCCTATCGTGTTCGCCGGCGAGGCCCGGAGCCTGGAGGAGCGGTTGGGCGAGGCTGCGCTGGGAAAAGCGTTCCTGCTGCAGGGTGGGGACTGCGCTGAAAGTTTCAAGGAGTTCAATGCCAACAACATTCGTGACACCTTCAGGATCCTCCTCCAGATGGGTGTCGTCATGATGTTCGGTGGCCAAATGCCAGTCATAAAGGTAGGGAGAATGGCGGGTCAGTTTGCGAAGCCAAGATCGGATCCCTTCGAGGAGAAGGACGGCGTGAAGCTGCCCAGCTACAGAGGCGATAACGTGAACGGAGATGCTTTCGATGAGAAGTCGAGGATTCCGGATCCTCAGAGGATGATCAGAGCTTACTGTCAAGCGGCGGCTACTCTCAACCTTCTACGAGCTTTTGCCACCGGAGGTTATGCTGCTATGCAGAGGGTCACTCAGTGGAATTTGGACTTCACACAGCATAGCGAGCAGGGAGACAGGTACCGGGAGCTTGCTCACCGAGTTGATGAGGCCCTTGGATTCATGGCTGCTTCTGGGCTCACAGTGGACCATCCAATAATGAAAACAACTGAATTCTGGACTTCTCATGAGTGCTTGTTGTTGCCATATGAACAGTCATTGACTAGGTTGGATTCAACTTCTGGTCTCCACTATGACTGCTCAGCCCACATGCTCTGGGTTGGGGAACGAACCCGACAACTGGATGGTGCCCATGTTGAGTTTCTAAGAGGCGTTGCTAATCCCCTGGGAATTAAGGTAAGTGATAAAATGGATCCAAATGAGCTTGTTAAACTCATCGAGATCTTGAATCCCCAAAACAAACCAGGAAGAATTACTGTGATCACGAGGATGGGAGCTGAGAATATGAGAGTGAAGCTTCCACATCTAATACGGGCAGTGCGCAGAGCAGGGCAAATTGTCACGTGGGTCAGCGATCCTATGCATGGAAATACCATCAAAGCTCCCTGTGGTCTCAAAACTCGCCCCTTCGATGCCATCAGGGCGGAGGTGAGAGCGTTCTTTGACGTGCATGAGCAAGAAGGAAGCTACCCAGGAGGGGTTCACCTAGAGATGACGGGTCAGAATGTAACTGAGTGCATTGGTGGGTCAAGGACGGTCACATTCGATGACTTGAGCTCACGTTACCACACTCACTGTGACCCCAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATAGCTGAACGGCTCAGAAAGAGTAGGATCAGGTCGCAGCAGCCTATTGCATCTGTATGA 1599 0.5447 MAVSTSNSLIPTKTLMPPTNTLTPPTKLYQSTNPARPGLRPIVAVHAAEPAKNPVVSEKPAKPQPAPAAPARNAGQGKWALDSWKSKRALQLPEYPNQEELESVLRTLDAFPPIVFAGEARSLEERLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVMMFGGQMPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYRELAHRVDEALGFMAASGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLHYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSYPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQQPIASV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1247 532 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 79 521 IPR002480 GO:0003849|GO:0009073
Dod08g1247 532 SUPERFAMILY Aldolase 76 519 - -
Dod08g1247 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 3 530 IPR002480 GO:0003849|GO:0009073
Dod08g1247 532 Pfam Class-II DAHP synthetase family 79 515 IPR002480 GO:0003849|GO:0009073
Dod08g1247 532 Gene3D Aldolase class I 112 278 IPR013785 -
Dod08g1247 532 Gene3D Aldolase class I 279 520 IPR013785 -
Dod08g1247 532 MobiDBLite consensus disorder prediction 51 77 - -
Dod08g1247 532 MobiDBLite consensus disorder prediction 1 33 - -
Dod08g1247 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 3 530 - -
Dod08g1247 532 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1247 Dod-Chr8 17269082 17273974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1247 K01626 - gmx:100797019 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1247 08 17269082 17273974 Dod08g1247 08 17269082 17273974 ECH
Dod08g1247 08 17269082 17273974 Dod09g1281 09 33923569 33928238 PCT