Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1224 ATGAAGACAACCCTTCTGGTAGCAAACTCCATCCTTCTTGCAATAGGCACTTCCGGTGGCCCACTCGTCATGCGCCTCTACTTCATCCACGGCGGCAAACGCATCTGGCTCTCCAGCTTCCTTGAAACCGCTGGCTTCCCCATCATGCTCCTTCCCATAGCCATCTCTCACATCCACCACAAACACAAACACCACCAAAACGAACACCACAACGACACCACCAACACCTCAAAACCGAAGAACCTTGTCTCTATGAAGCCACCTTTGTTTGTTGCCTCTGCAATCATCGGAATCCTCACCGGCCTCGATGACTACCTCTACGCCTACGGCGTATCCCTTCTTCCCGTGTCCACCTTCTCTCTTATTCAAGCCTCCCACCTCTCTTTCACTGCCGTATTTGCTTTTCTTCTCGTGAAGCACAAGTTCACGGCTTATTCGGTGAACTCCATAGTGTTGCTGACTGTTGCGGCTGTGGTTTTAGCGATGCGTTCAAGTGGGGACCGTCCTCACGGTGAGTCCACTGAGAAGTATGTGATAGGCTTCGTTATGATCGTGGCTGCTGCGGCGTTGTATGGGTTCGTTTTGCCGCTTGTGGAGTTGGTGTACAAGAAGACCAAGCAAGATGTCACTTACTCTTTGGTCATGGAGATTCAGCTGGTTATGTGCTTCTTTGCTACCTTGTTCTGCACCATTGGGATGGTCATAAACAATGACTTTAAGGTGATCCCGCGAGAAGCTAAAGATTATGAGCTTGGAGAAACTAAGTACTATTATGTGCTGGTGTGGGGTGCTATAATGTGGCAGTTTTTCTTCTTGGGAGCAATAGGGGTTATCTTTTGTGCCTCGTCTTTGTTGTCTGGGATTGTAATTGCTGTGTTTCTTCCTGTTACGGAAGTGCTAGCTGTTATCTTCTACAAAGAGAATTTTCGAGCAGAGAAGGGGGTTGCTCTGGTACTGTCTCTTTGGGGCTTTGTGTCCTACTTTTATGGGGATATTAAACAAGCAAGGAAAAAGAACAAGAATCGTCGACCAGATACGGAGCAACCTCAAATTCTTCCTTCCTCCTTGTCCATGAAGTGA 1080 0.4796 MKTTLLVANSILLAIGTSGGPLVMRLYFIHGGKRIWLSSFLETAGFPIMLLPIAISHIHHKHKHHQNEHHNDTTNTSKPKNLVSMKPPLFVASAIIGILTGLDDYLYAYGVSLLPVSTFSLIQASHLSFTAVFAFLLVKHKFTAYSVNSIVLLTVAAVVLAMRSSGDRPHGESTEKYVIGFVMIVAAAALYGFVLPLVELVYKKTKQDVTYSLVMEIQLVMCFFATLFCTIGMVINNDFKVIPREAKDYELGETKYYYVLVWGAIMWQFFFLGAIGVIFCASSLLSGIVIAVFLPVTEVLAVIFYKENFRAEKGVALVLSLWGFVSYFYGDIKQARKKNKNRRPDTEQPQILPSSLSMK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1224 359 PANTHER PURINE PERMEASE 1 352 - -
Dod08g1224 359 PANTHER OS09G0467300 PROTEIN-RELATED 1 352 IPR030182 GO:0015211|GO:0016021
Dod08g1224 359 MobiDBLite consensus disorder prediction 338 359 - -
Dod08g1224 359 Pfam Purine nucleobase transmembrane transport 5 337 - -
Dod08g1224 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 87 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1224 Dod-Chr8 16483198 16485063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1224 1 355 Organic Solute Cotransporters AT1G28230 56.303 4.21e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1224 - - ccaj:109789210 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1224 08 16483198 16485063 Dod08g1224 08 16483198 16485063 ECH
Dod08g1224 08 16483198 16485063 Dod09g1252 09 33612017 33613862 PCT