Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1208 GAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTGTTTTAACGCATACTTCGCTAGTTTTCTTCAGAAGTGATCCAAATTTTATTTCTCAGAGGGGTGCTGAAGCAAATTTGACCCTTGGTGGCATCGACCTCAACAATTCAGGCAGTGTTATTGTCAAGGCAGATAAGAAGCTTCTAACTGTACAATTTCCTGATGCTGGTGATGGACGTGCATTTACACTTAAGGCTGAAACAACTGAAGATCTATATGAATGGAAGACTGCACTTGAGAATGCTTTGGCATTGGCACCAAGTGCTACTGATGCGATGGGGCAAAATGGTAACTTGAAGAATGATCAATCAGATTCAATTGATGGTTTATCAGACCAATTGAAGTATAGAGACACAATGAAATCTACAGTCACTGGCCGCCCAATTTTACTTGCTTTGGAAGATGTCGATAGAACTCCATCATTTTTGGAGAAAGCTTTGAGGTTCATAGAAAAGCATGGAGTTAAAATAGAAGGGATCTTACGACAAGCAGCTGATGTTGAGCATGTTGAACATCGAGTACAAGAATATGAACAAGGAAAAGTTGAGTTTTCTAAGGATGAGGACGCACATGTTATTGGTGATTATATTAAGCATATACTTCGAGAAAAGCCATCTGCTCCAATCCCTGCTTCTTGTTGCAAGGCACTGTTAGAAGCATGTCGAGCTGCACGTGTCAACAGGGTTCCCGCTATGCGTACGGCAATATCCGACAAATTTCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCTTGATGATGCAAACCGTAGCTTCTTTCAAAACTGTAAACAAGATGAGTTCACCAGCAGTGGCAGCTTGCATGGCACCATTACTTCTTTGCCTTCTTCTTGCTGGGGAGTGTGAGATTGAAAATGACTTTGATGTAGGCGGTGATAGTTCTGCTCAGCTTCTACAAGCAGCTACTGCAGCTAATCATGCTCAAGCAATTGTCATTACATTGTTAGAAGGATTTGACAGCATATTCGGGGAAGGTTCTGCATCCCCTGGCCCTGATATGTACACCGACTCAGATGAGAATGAATCTGGGAGTGAGGAGGCTACTGATGATGATTTGTCCTATGATGATTATTATGATGAGGAGGATGATGAATCAATAGTAGAGTCTAAAGTATATGTAGATGACGATATTCATATTGAAACTAGTAGTGAGACTGGAAGCTCTATGGTTGATGATGAACAAGATCATAAGGACCACAATCGTTCTAGTTCAACTTCAAAATCCTTAGAAGGGAGGAAAAATCTTGAACCCATGTCATCAAATACACTTGAAGTCTCAGTGCCTCAACATAAAGATATCAAAAGTTATGAAAATATCACAATTAAGATTGTTTGTGCAGATGAGCCTAGTAAGCCAACTAATTTTCTTACCATACTTAGAGCTGAAATTGAGAAGCTTGAAGTAGCTAAGTCAAAATTGCAAAAGCAGATTGCTGAGGAGGTGAAGGCTAGTGCAAAGCTGCAATCTAATATGGAAAAACGAAAGGAAGCTTTGCAAGAGCATCGTCTAGCTCTTGAGCGAGATGTTACTATACTACAGGAACAATTGAAAAAGCAGAAGAGTTATCGGGAAACTCTTGAAGTAGGACTCAATTTTCCTTTAGAACCCTTGTCTGATTTATCTAGCATTGATAAAAAGTTTAGTTTATCTTGA 1709 0.3991 IGWTSWKKRWFVLTHTSLVFFRSDPNFISQRGAEANLTLGGIDLNNSGSVIVKADKKLLTVQFPDAGDGRAFTLKAETTEDLYEWKTALENALALAPSATDAMGQNGNLKNDQSDSIDGLSDQLKYRDTMKSTVTGRPILLALEDVDRTPSFLEKALRFIEKHGVKIEGILRQAADVEHVEHRVQEYEQGKVEFSKDEDAHVIGDYIKHILREKPSAPIPASCCKALLEACRAARVNRVPAMRTAISDKFPEPNRRLLQRILLMMQTVASFKTVNKMSSPAVAACMAPLLLCLLLAGECEIENDFDVGGDSSAQLLQAATAANHAQAIVITLLEGFDSIFGEGSASPGPDMYTDSDENESGSEEATDDDLSYDDYYDEEDDESIVESKVYVDDDIHIETSSETGSSMVDDEQDHKDHNRSSSTSKSLEGRKNLEPMSSNTLEVSVPQHKDIKSYENITIKIVCADEPSKPTNFLTILRAEIEKLEVAKSKLQKQIAEEVKASAKLQSNMEKRKEALQEHRLALERDVTILQEQLKKQKSYRETLEVGLNFPLEPLSDLSSIDKKFSLS* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1208 568 Gene3D - 2 100 IPR011993 -
Dod08g1208 568 Gene3D Rho GTPase activation protein 120 341 IPR008936 GO:0007165
Dod08g1208 568 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 1 457 - -
Dod08g1208 568 MobiDBLite consensus disorder prediction 343 444 - -
Dod08g1208 568 Pfam RhoGAP domain 150 291 IPR000198 GO:0007165
Dod08g1208 568 SMART PH_update 3 96 IPR001849 -
Dod08g1208 568 MobiDBLite consensus disorder prediction 407 424 - -
Dod08g1208 568 ProSiteProfiles PH domain profile. 1 94 IPR001849 -
Dod08g1208 568 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 1 457 - -
Dod08g1208 568 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 479 565 - -
Dod08g1208 568 SUPERFAMILY GTPase activation domain, GAP 148 342 IPR008936 GO:0007165
Dod08g1208 568 CDD RhoGAP 150 288 - -
Dod08g1208 568 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 479 565 - -
Dod08g1208 568 Pfam PH domain 5 93 IPR001849 -
Dod08g1208 568 SMART RhoGAP_3 147 337 IPR000198 GO:0007165
Dod08g1208 568 SUPERFAMILY PH domain-like 3 101 - -
Dod08g1208 568 MobiDBLite consensus disorder prediction 425 444 - -
Dod08g1208 568 Coils Coil 474 533 - -
Dod08g1208 568 ProSiteProfiles Rho GTPase-activating proteins domain profile. 141 340 IPR000198 GO:0007165
Dod08g1208 568 MobiDBLite consensus disorder prediction 356 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1208 Dod-Chr8 16107877 16125290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1208 - - cam:101498807 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1208 08 16107877 16125290 Dod08g1208 08 16107877 16125290 ECH