Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1204 ATGCGCGTGACCGTGGATCTAGGGTTTTCTCCTCGCCTGGTCCTCGTCCTTCTGGTTTGCTTCGCGGTTTCGGTGATCGGGTTCGTGGTCCGCCGCAAATGGCGGAGGGCGGTGGCGAGGGCGGAGGAGGTTAAGAGGCTGCTTGTCCTGGCGGCGGAGGAGTCCGCCAGGGCCGAGAGCGAGGCGGCGTACCAGTACTACGGCGCTGTTTCGGTCCCCAGCAAGAGCAACCAGTGTGCCGTGTGCTTCTGTCCCACCACCACGCGCTGCGCGCGTTGCAAAGCTGTTCACTACTGTTCTGGTAAGTGCCAAATTGTTCATTGGCGTCAAGGTCACAAAGAAGAATGTCTTCCTCCCAGTGATACTCATCAGACTGATGATCTGGTAAGAGATCTTGGCAAAAAGGTGGAAGAGCAACACTGCGATGAAGTTCACGATGAGAAGTCTCAGATCGAGAGAACAGAGGATAAAACATCTTCTGAGAAACCCCCATTGTCTCAGACAAGCCTTTCTCCCAAAATCTCATGTAGAAAGGATGATGATAGAAGAGTTGAGTCTCTTGCTCAGGGAAGCATTACAGACTCTTATTCTGATTTATGTAGTAATTCATTTTCTGGATTCTCGGCTTCCAATAGTGCTAGTGAATCATCGGATGATTCTTTCTCAAATGTGCATGAGACCACACAGGGACATACCTTTGCTGAAGCCACTCTTGACAATTCTAATGCCGCTTCTAATGATGACAGCATGGATGTCGCTGGTTTGTTGTCACCTAAGTTTGCTAGTTTGGTTGATGCAGTAGATGGTTTTTCTTCAATGCATAAATTGAATCAAGTTCAACCTGGTTTTAGTACAGAAGAAAGTAAGCTAACATCAAATGGTAGTTCAGGCTTGAGTATGGGGAAGGGGCCAACAATTGAGCCTTCCACAATGCCTTCTGGATCCTGGAATAAACCTCTTGATTCAAGGGTGATCAAAGGTGTTGCTAATGGCGGCCCTCTGCCATCCCACTATGATGATGCTCTATCAAAGTCTTCTGGCAATAATGTGTCATGTACAGGATCAGCATCTTCAGAGAATGAAGCCATGAATTCTTCAGGTTGTGCAGGTGCTTCTAGCATCCATAACTTTCAATCTGTTGGTTCTAAGGTATCAAATCATGTTGTGAACCACCCTTCCAGCATCTTGAAGTCGGCTGACATTAGAGATCTGCCACATGCATTAGCTGATACTAAGTTAGGTTCTAGAGCTGAACGGAACTCACATTACAGTACAAAGTTGAGGAATAATGACAGTCAATCTGGCACAGCTACCCCCTCTGTGGTTGTTAGCTCTCCTCCTCATTCTAAGAATGGGCTAAAATCATCCGTTCTGAAAGCTGTTGATCAGTTTAAAGGATCAAATTTGTCAAGACACTTTCCACTGGCTGCTGGGAGTGATATTGCTGGAAGATACAGTGATAAGGGTCTTTTTCCATATGATTTGTTTGTCAAGCTTTATAACTGGAACAGAGTGGAGTTACAACCATTTGGTCTTAAAAATTGTCACAACAGCTGTTATGCTAATGCTGTACTCCAGTGCTTGGCATTTACACCGCCCCTGACTGCTTATTTGCTTCAAGGACTTCATTCTAAATCATGTGCCAATAAAAATTTTTGTTTCACCTGCGAGTTTGAAAGTTTGATTTTGAAGTCAAAAGATGCAAAATCTCCACTCTCGCCTATGGGCATATTGTCTCAACTACAGAGTACTGGGAGTCAACTTGGTAATGGAAAGGAAGAAGATGCACATGAATTTCTAAGGCATGCTATTGAGACAATGCGATCTGTTTGCCTTACGGAACCGGGGATTAATGCATCAGACTCTTTAAAAGAGGAAACTAATTTAATGGGTCTAACATTTGGAGGCTATCTTCGATCAAAGATAAAATGCATGAAATGTGGAGGAAAATCTGAGCGTCAAGAAAGGATGATGGATCTAACTGTTGAGATAGAAGGGGAGATAGCAACCCTGGAGGATGCCCTTTGCCGGTTTACAAGCACTGAGACTCTGGATGCAGATAACAAGTACCACTGTGTCAGGTGTAAATCTTATGAGAAGGCCAAGAAGAAACTGACAGTTTCAGAGGCACCTAATGTTCTTACTATTGCATTAAAGAGATTCCAGTCTGGAAAATTTGGGAAGCTCAATAAGCCTATTCAGTTTCCTGAAATACTTGACTTTGCACCTTTCATGAGTGGGACTAGTGATAGATCACCTATATACAGACTGTATGGGGCAGTTGTTCACTTGGATGTCATGAATGATGCTTTTACGGGTCACTATGTGTGCTACGTGAAGAATTTTCAAAATAAGTGGTTCAAGGTTGATGACAGTGTGGTGACAGCTGCTGAATTGGAGAAAGTTTTGACAAAAGGAGCGTACATGCTTTTTTATGCAAGGTGCTCACCAAGGGCCCCAAGATTAATCAGGAACAGCATTGTATCCTCAGATTCAAAAATGAAAGTAAATGGGAAAGCTTTCACAATGAAATCAAGACATGCACCTTCGTATTCTGGTTCACCGGCCTTAGAGACTCTCTATTCAAAATTTCACCACATAAAAAGGGTTTTGGAAGAAGACACAAGTGATTGTTCATCCCTTTTCAGCAACAATTCCGATGAAGGTTCTTGCAGTACAGATTCGACCAGTAATGAGGACTTTGCCGATTATATTTTCGAGTCGGGGCATGGCTTGGGTGGCATGGTGAGAAATTCTGATTCTGACGCTTCCTCCTCATTGTCATCTCGACATTTGCCACTTTCCGATATGGAACCCTATGATTCATTTTTATCAGATGTGCCCAGGTTGCGGCCACCTCCGGCTGGTCCGAGGGTGGAGATAGGTGGTCTTTTGTACAGGGGCAGACCAGTGGATGTTGAGAGGAGAGGGGGAGGTGTTTTTCATTTGCATCCTGACACACATGTAGAGCATGATAGGAAGTTAGATACAGGTAGGAATAGCAGCAGTATTAGGGAAACTGACCTTCAGACAGTAGGATCTAACCATTATAATAATGTAAAATCTGGTGTATCTTTTAGAACGTCAAGGGAAAGAACGGATTGA 3105 0.4406 MRVTVDLGFSPRLVLVLLVCFAVSVIGFVVRRKWRRAVARAEEVKRLLVLAAEESARAESEAAYQYYGAVSVPSKSNQCAVCFCPTTTRCARCKAVHYCSGKCQIVHWRQGHKEECLPPSDTHQTDDLVRDLGKKVEEQHCDEVHDEKSQIERTEDKTSSEKPPLSQTSLSPKISCRKDDDRRVESLAQGSITDSYSDLCSNSFSGFSASNSASESSDDSFSNVHETTQGHTFAEATLDNSNAASNDDSMDVAGLLSPKFASLVDAVDGFSSMHKLNQVQPGFSTEESKLTSNGSSGLSMGKGPTIEPSTMPSGSWNKPLDSRVIKGVANGGPLPSHYDDALSKSSGNNVSCTGSASSENEAMNSSGCAGASSIHNFQSVGSKVSNHVVNHPSSILKSADIRDLPHALADTKLGSRAERNSHYSTKLRNNDSQSGTATPSVVVSSPPHSKNGLKSSVLKAVDQFKGSNLSRHFPLAAGSDIAGRYSDKGLFPYDLFVKLYNWNRVELQPFGLKNCHNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKNFCFTCEFESLILKSKDAKSPLSPMGILSQLQSTGSQLGNGKEEDAHEFLRHAIETMRSVCLTEPGINASDSLKEETNLMGLTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEIATLEDALCRFTSTETLDADNKYHCVRCKSYEKAKKKLTVSEAPNVLTIALKRFQSGKFGKLNKPIQFPEILDFAPFMSGTSDRSPIYRLYGAVVHLDVMNDAFTGHYVCYVKNFQNKWFKVDDSVVTAAELEKVLTKGAYMLFYARCSPRAPRLIRNSIVSSDSKMKVNGKAFTMKSRHAPSYSGSPALETLYSKFHHIKRVLEEDTSDCSSLFSNNSDEGSCSTDSTSNEDFADYIFESGHGLGGMVRNSDSDASSSLSSRHLPLSDMEPYDSFLSDVPRLRPPPAGPRVEIGGLLYRGRPVDVERRGGGVFHLHPDTHVEHDRKLDTGRNSSSIRETDLQTVGSNHYNNVKSGVSFRTSRERTD* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1204 1034 MobiDBLite consensus disorder prediction 1002 1026 - -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 341 369 - -
Dod08g1204 1034 Coils Coil 41 61 - -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 426 452 - -
Dod08g1204 1034 SUPERFAMILY HIT/MYND zinc finger-like 74 118 - -
Dod08g1204 1034 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 510 815 IPR028889 -
Dod08g1204 1034 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20 1016 - -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 989 1034 - -
Dod08g1204 1034 Pfam Ubiquitin carboxyl-terminal hydrolase 510 812 IPR001394 GO:0004843|GO:0016579
Dod08g1204 1034 MobiDBLite consensus disorder prediction 139 160 - -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 139 180 - -
Dod08g1204 1034 SUPERFAMILY Cysteine proteinases 506 818 IPR038765 -
Dod08g1204 1034 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 20 1016 - -
Dod08g1204 1034 Gene3D Cysteine proteinases 503 824 - -
Dod08g1204 1034 ProSitePatterns Zinc finger MYND-type signature. 79 116 IPR002893 -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 281 317 - -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 412 453 - -
Dod08g1204 1034 Pfam MYND finger 79 116 IPR002893 -
Dod08g1204 1034 ProSiteProfiles Zinc finger MYND-type profile. 79 116 IPR002893 -
Dod08g1204 1034 MobiDBLite consensus disorder prediction 281 369 - -
Dod08g1204 1034 Gene3D - 68 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1204 Dod-Chr8 16052527 16060519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1204 490 819 Miscellaneous Gene Families AT4G31670 49.245 3.16e-115 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1204 K11855 - gmx:100782303 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1204 08 16052527 16060519 Dod08g1204 08 16052527 16060519 ECH