Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1185 ATGGACCACAAAACCGACAAAGACACAACCCTTACCGACGTCGTTTTGCAGATCCTTCTCGTCCTCGTTATGGCCTTCTCCTTCCTCTTCATGCACGACGTCCCCAAGAAGCTCTTCGCCAGGCTCCGCCTCCGCAACCGGGCCGACATGCAGGCCAACCACCACTTCGTCCGAGGCGCCCAGCTCCTCGCCCGGGCCCGGGCCTCACCCTCCCGATCCTCCGCCTCCTCCCTCGCCAAGCAGGCCCAGGAAGAGGCCCGACAGGCCATCGCCCTCGACGCGACCGACGCCGCCGCCCACCTCCTCAACGCCTTCGCGCTCGACCTCCGCGGGCTCCGCGCCGCGGCGCTCGAGGCCCTCGACGCCGCGCTGTCGCCGGAGGCGGCCCGGTCTCTCGGCGACGGCGAGAGGGCGGAGGCGCTCCTGAAGCGGGCCGAGCTGAGGATGGCGGGCCCGGGTAATCGCGGGCTGGTGGACCCAGCGATTGCGGATCTTGAGGAGTCGGTGAGGCTGAGCCCGGAGAACGCGAGGGCGTTTTGTTTGTTGGGAGAGTGCTTTGAGGGGAAGAGGATGAAACAAGAGGCTACGAAAGCGTACCTGGAGGCTCTGAAGCTGGAGCCGCGGTTGCGTGCGGCACAAGAAGGGGTTCGGAGATTGGGTTCGTAG 666 0.6682 MDHKTDKDTTLTDVVLQILLVLVMAFSFLFMHDVPKKLFARLRLRNRADMQANHHFVRGAQLLARARASPSRSSASSLAKQAQEEARQAIALDATDAAAHLLNAFALDLRGLRAAALEALDAALSPEAARSLGDGERAEALLKRAELRMAGPGNRGLVDPAIADLEESVRLSPENARAFCLLGECFEGKRMKQEATKAYLEALKLEPRLRAAQEGVRRLGS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1185 221 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Dod08g1185 221 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 217 - -
Dod08g1185 221 Gene3D Tetratricopeptide repeat domain 40 215 IPR011990 GO:0005515
Dod08g1185 221 SUPERFAMILY TPR-like 80 211 IPR011990 GO:0005515
Dod08g1185 221 SMART tpr_5 176 209 IPR019734 GO:0005515
Dod08g1185 221 SMART tpr_5 138 175 IPR019734 GO:0005515
Dod08g1185 221 PANTHER - 11 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1185 Dod-Chr8 15528543 15533153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1185 - - gmx:100809739 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1185 08 15528543 15533153 Dod08g1185 08 15528543 15533153 ECH