Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1175 ATGGAAGTTGTGTCGGATCAAGCCACCAGTGTATGCACTCACTGTGATCGAGCTATCCCTGCTGCAAATATTGACTTGCATTATGCTCACTGTTCCCGGAATCTTGAAAAGTGCAAAGTTTGTGGAGATATGGTTCCCAAAAAACATGCTGAGGATCACTACTTAAGCACCCATGCACCGGTTTCCTGTTCATTGTGCAGTCAGACGATGGAGCGTGATATTTTTGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATCGTCACTTGTGAGTTCTGTGAGTTCCCATTGCCAGCAATTGATCTGGCCGAGCATCAGGAAGTGTGCGGGAATCGAACAGAACTTTGTCACCTTTGTAACAGATATGTCAGACTTCGTGAAAGATGCAGCCATGAAGCTCGGTGCAATGGCATCCAAGATGTTACTTTGGGGGGTTCTTCAACGAATGTAAGAGAAGCTGAGAGAGGGGCACGTCCTCGAAGGAGGCAGCAGAATGACTTTTCAACTAAACGTCTTCTTATCACAATAGCAATTACTGGTATTGCTATTATACTGGGATCGATGTTTCTACGGAGGAAGGTAGAACCTAGTGAAGTGCATTAG 603 0.4494 MEVVSDQATSVCTHCDRAIPAANIDLHYAHCSRNLEKCKVCGDMVPKKHAEDHYLSTHAPVSCSLCSQTMERDIFDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNRYVRLRERCSHEARCNGIQDVTLGGSSTNVREAERGARPRRRQQNDFSTKRLLITIAITGIAIILGSMFLRRKVEPSEVH* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1175 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Dod08g1175 200 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 1 200 - -
Dod08g1175 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 57 IPR013083 -
Dod08g1175 200 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1175 Dod-Chr8 15243855 15248302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1175 - - ccaj:109808130 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1175 08 15243855 15248302 Dod08g1175 08 15243855 15248302 ECH