Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1168 ATGACACCAGAATACAAGAATTACCAAAAGCAAGTTGTCCTTAACAGCGCAGCATTTGCTCAGAGCTTGCTAGAAAAAGGCTACGACATTGTATCTGGTGGAACAGATAACCATTTATTGTTGGTGAACTTAAGAAACAAGGGCATTGACGGCTCAAGGGTTGAGAAGATGTTAGAAGCAGTTCACATAGCAGCCAATAAAAATACTGTTCCAGGGGATGTGTCTGCTATGATTCCTGGAGGCATCCGAATGGGGTCCCCTGCCCTCACATCCAGGGGGTTTGTTGAGGAAGATTTTAAAAAAGTAGCAGAGTTCTTTGATGCAGGAGTCAAGTTAGCCTTACAGATTAAGGCAAATACCACAGGTACAAAGTTGAAGGATTTTGTGGCAACTATGCAATCAGATGCACATCAATCTGAGATTGCTAAGGTCCGTCATGAGGTTGAGGAATATGCCAAGCAGTTTCCAGCAATCGGTTTCGAGGTGGAGAAAATGAAGTATAATAAGTGA 510 0.4275 MTPEYKNYQKQVVLNSAAFAQSLLEKGYDIVSGGTDNHLLLVNLRNKGIDGSRVEKMLEAVHIAANKNTVPGDVSAMIPGGIRMGSPALTSRGFVEEDFKKVAEFFDAGVKLALQIKANTTGTKLKDFVATMQSDAHQSEIAKVRHEVEEYAKQFPAIGFEVEKMKYNK* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1168 169 Gene3D Aspartate Aminotransferase, domain 1 2 160 IPR015422 GO:0003824
Dod08g1168 169 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL 1 168 - -
Dod08g1168 169 Pfam Serine hydroxymethyltransferase 1 105 IPR039429 -
Dod08g1168 169 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1 168 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Dod08g1168 169 SUPERFAMILY PLP-dependent transferases 1 159 IPR015424 -
Dod08g1168 169 Coils Coil 134 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1168 Dod-Chr8 15110182 15111335 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1168 K00600 - gmx:100816213 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1168 08 15110182 15111335 Dod08g1168 08 15110182 15111335 ECH