Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1029 ATGGTTAAAGTTTCCATAATAGATAAGTTTGAAAGCTTTCTGATAGATCCATATCTTGAAAACATAACAATTATGCTTTTCAATGGCATCAAATGTGGCGACCGTGGGGCAGCAAATCAACCGGTCCGGATCCATAGCACGTCGTCATCGTCACCGTCACCGTCACCGTCCGCTTCTTCTTCTTCCCCATCCCTCTTCTCCTGCTCCTCCTTCAAAGACATCCAATCCCTCTGCCTCGACGACTCCGAACCCCAACACCAACAGCAACAGCCGCTACCCACCAAGAAACCCTCCGTCTTCCACCGAGTCCGGCTCGCCAACTCGCTCCTCCGCACCTGGTCAACTCACCACCAACAACAATCCCCAAAACCTCCCAGGTCCCAATCCCAACTCCAGGATGACCCCACACCCTTCATCCCCGGCGCCGACCAGCGCGTGGTGGTCTACTTCACCAGCCTGCGCGTGGTGAGGCCCACCTTCGAGGCCTGCAAGGCAGTCCTCTCCATCCTCCACGGCTTCCGCGTCCCTCTCGACGAGCGAGACGTGTCCATGGACTCCGCCTTCCTGACCGAGCTCAACCGGGTCATGGGCCGGCCCGGGCTTACGCTGCCACGTGTCTTCATCTCCGGGAGGTATGTCGGTGGCGTTGAGGAGGTTAGCAAGATGAACGAGACGGGGGAGCTCAAGAAGGTTCTGGAAGGTTTGCCGAAGACCGAGGTTGGGGATTGCTGCCACGTGTGCGGGGGTCACAGGTTCGTTCTGTGCGACCAGTGTGACGGTAGCAGGAAGGTGTACGCGGAGAAAGGAGGGTTCAGGACATGTGGGAATTGCAACGAGAATGGACTCCTCAGGTGCCCTTCTTGTTTCACAGCACCAATATTGTCATGA 888 0.5664 MVKVSIIDKFESFLIDPYLENITIMLFNGIKCGDRGAANQPVRIHSTSSSSPSPSPSASSSSPSLFSCSSFKDIQSLCLDDSEPQHQQQQPLPTKKPSVFHRVRLANSLLRTWSTHHQQQSPKPPRSQSQLQDDPTPFIPGADQRVVVYFTSLRVVRPTFEACKAVLSILHGFRVPLDERDVSMDSAFLTELNRVMGRPGLTLPRVFISGRYVGGVEEVSKMNETGELKKVLEGLPKTEVGDCCHVCGGHRFVLCDQCDGSRKVYAEKGGFRTCGNCNENGLLRCPSCFTAPILS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1029 295 MobiDBLite consensus disorder prediction 41 64 - -
Dod08g1029 295 CDD GRX_GRX_like 145 285 - -
Dod08g1029 295 Pfam Glutaredoxin 147 213 IPR002109 -
Dod08g1029 295 Gene3D Glutaredoxin 142 234 - -
Dod08g1029 295 MobiDBLite consensus disorder prediction 114 135 - -
Dod08g1029 295 ProSiteProfiles Glutaredoxin domain profile. 134 239 - -
Dod08g1029 295 PANTHER OS08G0554699 PROTEIN 50 289 - -
Dod08g1029 295 SUPERFAMILY Thioredoxin-like 143 233 IPR036249 -
Dod08g1029 295 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 50 289 - -
Dod08g1029 295 MobiDBLite consensus disorder prediction 114 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1029 Dod-Chr8 12822856 12825403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1029 K17479 - gmx:100810320 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1029 08 12822856 12825403 Dod08g1029 08 12822856 12825403 ECH
Dod08g1029 08 12822856 12825403 Dod04g0385 04 5043831 5045067 ECH
Dod08g1029 08 12822856 12825403 Dod05g0505 05 7165330 7166656 ECH
Dod05g0505 05 7165330 7166656 Dod08g1029 08 12822856 12825403 PCT