Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0902 ATGGAGCACCTTAAACCAAACTCCGCAAATTCTTCCCCTCTTACTCCACTGACCTTTTTGGACAGGGCGGCCATCGTCTACGGCGACTCCACGTCAATAATCTACAACCGCACCACTTACACGTGGTCCCAGACTCACCGTCGATGCCTCCAGCTGGCATCATCCCTCTCATCCATCGGGATCGGGAGGGGACACGTGGTGTCCGTTCTCTCCCCAAACAACCCAGCAACCTACGAGCTCCACTTCGCAGTGCCAATGTCAGGCGCAATCCTCAACAACCTTAACCTCCGCCTCGACCACCGCACGCTCTCCGAGCTCCTGCGCCACAGCGAATCAAAACTCCTCTTCGTTTACGCCCTCTCATTTCCCCTCGTCCACAAAGCGCTCTCCTTATTCCCTCCAAACACCGCACGCCCAATGCTCGTCCTCATAACCGACGATGCGGTCGCAACGCACACAAGCCCGTCCTGCCTAACTACCCTCGATGATTTCATGGACACGTACGAGGGCCTCATCAGCAAGGGCGACCCAACGTTTAAATGGGCCAGGCCCAACTCTGAGTGGGACCCAATAACGCTAAACTACACCTCCGGAACGACGTCGTGTCCCAAAGGCGTGGTGCATTGCCACAGAGGAGCGTTCCTCATGGCGCTCGATTCGTTAATCGACTGGTGCGTGCCGAAGAACGCGGTTTATTTGTGGACACTTCCGATGTTCCACTCTAACGGGTGGAGCTTCCCGTGGGGGATCGCAGCCGTTGGAGGCACCAACGTATGCACGCGTAAGATCGACGCGCAGACGATCTACCGTCTGATCGAATCACACGGCGTGACGCACATGTGCGCCGCGCCTGTGATTCTCAACATGCTTATTACCAGCTTCGACCAGGGCGAGCCGCTGAAGATCCCGGTTCATGTTCTCACCGGCGGTTCGCCGCCGCCGGTGGGGATTTTGCGGCGCGCGGAGGAGATAGGGTTCGTGGTGAGCCATGGGTTCGGGATGACGGAGACGTGTGGGGTGGTGATTTCTTGCGCATGGAAGAGGGAGTGGGATTTGTTTAATGCGGCGGAGAGGGCGAGGATGAAGGCGAGGCAAGGGGTGAGGACGGCGGCGGCGATGGTGGAGGTGGACGTGGTGGAGCCCGAGTCAGGACTTAGTGTTAAACGCGACGGGTTGACTCAGGGCGAAATCGTGGTCAGAGGGCCTTGCGTAATGCTAGGGTACCTCAAGGACGAAGATGGCACGTTGAAGTGCATGAAGAACGGATGGTTGTACACTGGGGATGTGGCGGTCATGCATGAGGATGGTTACTTGGAGATTAAGGACAGGGCCAAAGATGTTATAATTAGTGGTGGCGAGAATTTGAGCAGTGTGGAGGTGGAAGCGGTGCTGTACACGCACCCTGCGGTGAGCGAGGCGGCGGTGGTGGCGAGGCCTGATGAGTTTTGGGGGGAGACGCCGTGCGCGTTCGTGAGGCTCAAGGGAGGGTTGGAGAGGAGGCCGTCGGAGGAGGAGATGATGGGGTTTTGTAGGGAGAGGTTGCCGCACTTCATGGTGCCAAAGACGGTGGTGTTCAGGGAGGAGCTGCCGAGGACCTCCACCGGGAAGATTCAAAAGTACTTGCTGAGAATGGATGCTAAGGCTATGGGTTCCTTGTCCCCACCGCTGCCACTAGCACCACCAAAATTTATTAGCCGCATGTGA 1704 0.5751 MEHLKPNSANSSPLTPLTFLDRAAIVYGDSTSIIYNRTTYTWSQTHRRCLQLASSLSSIGIGRGHVVSVLSPNNPATYELHFAVPMSGAILNNLNLRLDHRTLSELLRHSESKLLFVYALSFPLVHKALSLFPPNTARPMLVLITDDAVATHTSPSCLTTLDDFMDTYEGLISKGDPTFKWARPNSEWDPITLNYTSGTTSCPKGVVHCHRGAFLMALDSLIDWCVPKNAVYLWTLPMFHSNGWSFPWGIAAVGGTNVCTRKIDAQTIYRLIESHGVTHMCAAPVILNMLITSFDQGEPLKIPVHVLTGGSPPPVGILRRAEEIGFVVSHGFGMTETCGVVISCAWKREWDLFNAAERARMKARQGVRTAAAMVEVDVVEPESGLSVKRDGLTQGEIVVRGPCVMLGYLKDEDGTLKCMKNGWLYTGDVAVMHEDGYLEIKDRAKDVIISGGENLSSVEVEAVLYTHPAVSEAAVVARPDEFWGETPCAFVRLKGGLERRPSEEEMMGFCRERLPHFMVPKTVVFREELPRTSTGKIQKYLLRMDAKAMGSLSPPLPLAPPKFISRM* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0902 567 SUPERFAMILY Acetyl-CoA synthetase-like 12 544 - -
Dod08g0902 567 CDD ttLC_FACS_AEE21_like 12 543 - -
Dod08g0902 567 PANTHER ACYL-ACTIVATING ENZYME 2 552 - -
Dod08g0902 567 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Dod08g0902 567 Pfam AMP-binding enzyme C-terminal domain 459 536 IPR025110 -
Dod08g0902 567 Gene3D - 2 444 IPR042099 -
Dod08g0902 567 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 552 - -
Dod08g0902 567 Pfam AMP-binding enzyme 22 450 IPR000873 -
Dod08g0902 567 Gene3D - 445 549 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0902 Dod-Chr8 11030007 11032204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0902 1 549 EF-hand Containing Proteins AT1G21540 60.036 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0902 - - ahf:112702625 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0902 08 11030007 11032204 Dod08g0902 08 11030007 11032204 ECH