Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0901 ATGGAACAACTGAAGCCAAGCCCTGCAAACTCCTCCCCACTCACCCCACTCGGCTTCTTGGACAGAGCAGCCACCGTTTACGGCGACACCCCTTCCGTCATCTATAATGACCTCACCTTCACTTGGTCAGACACTCGCCGGCGGTGCCTCCAGCTTGCCTCCGCACTCTCCTCCCTCGGGATCAGCCGCGGCGACGTCGTCTCCACCGTGGCACCCAACATCCCCGCCATGTACGAGCTCCACTTCGCCGTCCCCTTCGCCGGCGCCACCCTCAACAACATCAACACCCGCCTCGACGCCCGCACCGTCTCCGTCATCCTCCGTCACGCCGAGTCCAAGCTCGTCTTCGTGGACACAGCCTCACGTGATCTCGTCCTCGAAGCAATTTCCTTATTAACAAATCACCACCGTCCGATCCTCATCCTTATCGCCGACGATACAGTCGAACCCCTAAACCCTTCATCGTCCACTGCTCATTTCAAGGACACTTACGAGGGGTTAATTACCAAGGGCGATCCGAATTTTAAATGGGTCCAGCCAAATAGCGAGTGGGACCCAATCGCGCTTAACTACACCTCCGGAACGACGTCGTCTCCGAAAGGCGTTGTTCAGTGCCACAGAGGAGTGTTCATCATAACCGTCGACTCGTTGATCGATTGGGCGGTTCCGAAACAACCGGTTTACTTATGGACCCTACCGATGTTCCACGCTAACGGCTGGAGCTTCCCGTGGGGGATCGCTGCCGTTGGAGGAACCAACATCTGCGTCCGCAAATTCGACGCGCCGGTAGTTTTCTCCCTTATCACGCGCCACCGCGTCACGCACATGTGCGGCGCGCCCGTGGTACTCAACATGCTCACGAACTCACCGGACAATAAGCCGTTAGAGAATCCCGTCCAGATCCTCACCGCCGGCGCACCGCCGCCCGCAGCGGTGCTCCTCCGCACGGAGTCGCTAGGGTTTGTGATCAGCCACGGGTACGGTCTGACGGAGACGGCGGGGCTGGTGGTTTCCTGCGCGTGGAAGAGGAAGTGGAACAGTTTTCCGGCGACGGAGAGGGCGAAGCTGAAGGCGCGTCAGGGAGTGAGGACGGCTTTGATGACGGAGGTGGACGTGGTTACAAGCGAGGGGGAGCGCGTGAAGCGCGACGGTGTGTCGCTCGGGGAGGTAGTTATGCGCGGCGGTTGCGTGATGTTAGGGTACCTTAAAGACCCCGAAGGAACAGCAAACTGTTTCAAGAACGGTTGGTTCTACACTGGAGACGTTGGTGTCATGCATGAAGACGGCTATTTGGAGGTAAAAGATAGGTCTAAGGATGTTATTATTAGTGGTGGCGAGAATTTGAGCAGCGTGGAGGTGGAATCGGTGCTCTATACTCACCCGGCGGTGAACGAGGCGGCGGTGGTGGCGAGGCCCGACGAGTTCTGGGGGGAGACGCCGTGCGCGTTCTTGAGTTTGAGGGATAAAAGAGTGACCGAAAAGGAGATATTTGAGTTTTGCAGGGAGAACATGCCGCGTTACATGGTGCCGAAGACGGTGGTGTTTAAGGAGGAGCTTCCCAAGACTTCTACTGGGAAGGTTCAGAAGTTTGTGCTGAGGCAGATCGCGAAGGAGATGGGACCCATCCGGCGAAGTAAGATGTGA 1644 0.5754 MEQLKPSPANSSPLTPLGFLDRAATVYGDTPSVIYNDLTFTWSDTRRRCLQLASALSSLGISRGDVVSTVAPNIPAMYELHFAVPFAGATLNNINTRLDARTVSVILRHAESKLVFVDTASRDLVLEAISLLTNHHRPILILIADDTVEPLNPSSSTAHFKDTYEGLITKGDPNFKWVQPNSEWDPIALNYTSGTTSSPKGVVQCHRGVFIITVDSLIDWAVPKQPVYLWTLPMFHANGWSFPWGIAAVGGTNICVRKFDAPVVFSLITRHRVTHMCGAPVVLNMLTNSPDNKPLENPVQILTAGAPPPAAVLLRTESLGFVISHGYGLTETAGLVVSCAWKRKWNSFPATERAKLKARQGVRTALMTEVDVVTSEGERVKRDGVSLGEVVMRGGCVMLGYLKDPEGTANCFKNGWFYTGDVGVMHEDGYLEVKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDEFWGETPCAFLSLRDKRVTEKEIFEFCRENMPRYMVPKTVVFKEELPKTSTGKVQKFVLRQIAKEMGPIRRSKM* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0901 547 Pfam AMP-binding enzyme C-terminal domain 452 526 IPR025110 -
Dod08g0901 547 Gene3D - 439 539 IPR045851 -
Dod08g0901 547 PANTHER ACYL-ACTIVATING ENZYME 2 542 - -
Dod08g0901 547 SUPERFAMILY Acetyl-CoA synthetase-like 11 538 - -
Dod08g0901 547 Pfam AMP-binding enzyme 21 443 IPR000873 -
Dod08g0901 547 Gene3D - 3 438 IPR042099 -
Dod08g0901 547 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 542 - -
Dod08g0901 547 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Dod08g0901 547 CDD ttLC_FACS_AEE21_like 12 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0901 Dod-Chr8 11010312 11012894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0901 1 539 EF-hand Containing Proteins AT1G21540 63.024 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0901 - - gmx:100779857 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0901 08 11010312 11012894 Dod08g0901 08 11010312 11012894 ECH