Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0844 ATGATGGCTTTGGTTTCCCAAGAAAACGCCGTTGCATTGGTTTCTCGTACCGGCAGGGAGTTGCAACGCTACAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCATACAGATATAAACCTGGGGAGCCTACCTCATTGTTAGAGGCATCATCACAAGAGTTAGAAGTTCTTGTTATCACTTCTAAGAAAGGCAAAGGGATGCTATTTCCAAAGGGAGGCTGGGAATTAGACGAATCTAAGAAGGAGGCAGCTTTGCGAGAAACCTTAGAGGAAGCAGGAGTGCGAGGCACTGTTGAGGGTAAATTGGGTAGGTGGAGCTTCAAGAGCAAAACCCATGATACTTGCCATGAAGGCTATATGTTCCCTCTACTTGTTCAAGAGCAATTGGAGTTCTGGCCGGAGCAGGATGCTCGTCAAAGAACATGGATGAGCGTTTCAGAAGCAAGGGAAGTTTGTCAACTACTGGTGGATGAAGGAAGCTCTAGAAAGACTAGTAAATCGCCTCACGGCTTGTAA 519 0.4682 MMALVSQENAVALVSRTGRELQRYRKGRRQVVGCIPYRYKPGEPTSLLEASSQELEVLVITSKKGKGMLFPKGGWELDESKKEAALRETLEEAGVRGTVEGKLGRWSFKSKTHDTCHEGYMFPLLVQEQLEFWPEQDARQRTWMSVSEAREVCQLLVDEGSSRKTSKSPHGL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0844 172 CDD Nudix_Hydrolase_9 30 154 - -
Dod08g0844 172 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 13 158 - -
Dod08g0844 172 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 8 155 - -
Dod08g0844 172 ProSitePatterns Nudix box signature. 73 94 IPR020084 GO:0016787
Dod08g0844 172 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 8 155 - -
Dod08g0844 172 SUPERFAMILY Nudix 23 151 IPR015797 -
Dod08g0844 172 Pfam NUDIX domain 54 149 IPR000086 -
Dod08g0844 172 ProSiteProfiles Nudix hydrolase domain profile. 27 170 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0844 Dod-Chr8 10145351 10147097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0844 K07766 - gmx:100798559 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0844 08 10145351 10147097 Dod08g0844 08 10145351 10147097 ECH
Dod04g0217 04 2685780 2687889 Dod08g0844 08 10145351 10147097 PCT