Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0797 ATGTTGAAAGAAGCAGAAGAAGAGGAGGTATTGGCAATGTTGTTTGGATCAATTTTTAAGCTAGTGTGTTATAGATATAGAGAGCTAACATTTCATCATTCTCAAGAAGGCTCTCCTCACCAGAATTTGAGGATCGCATTTGTGCTGCTAGTAACATTGGTTTCACAGGCTCGATCCATAATACCAAGCCCAGGAGAAACTGTAATGGCTCAATGCTCTAACACAGATACTAGTGGTAGTGCACCTCAAATAAGTTCATGGTATGTAGATGCATCTTATGAAGAACTCAAAAAGGGAACTCACATAGTAAAAATCTCAGATGAGACCTTCAATTGTCCGTACTGCCCTAAGAGAAAGAACGGTTATGCGTACAAGGAACTCCTTCAACATGCTTCTGAGGTGTGTCATAGTAGTTCACTAAAGAAAAGTGCAAGAGAGAAGGCTAATCATCTGGCTTTAGTGAAATATTTGGAAAAGGATCTTGTGAGCATTGACGGCACATCAAAACCTGTAGATAAAGGTACCAAAGTATTAAGCCTAGGAGAAACTGCAAAGGGTCACTGCTCTGACAAGGATACTGATACAAGTGCATCTCAAATAAGTGGGTGGTATGTGAATAAATTTTATAAAGAACTCAAAAATGGTAGTCACATTGTGAAAACCTCAGATGAGACTTTCGCTTGTCCATACTGCCCTAAGAGCAGAAAACAGGATTATATGTACATTCAAATCCTAGCACATGCTTCTGGGGTGGGTCAGAGTAGTTCACAGAAGAGAAGCTTGAAAGAAAAGGCTACTCATCTGGCTTTAATGAAATATTTGAAAAAGGATATTAAGATTAAGGATGTGAGTTGTCCATCAGAACCTGCAGTTAAAGGTGCCACAACAATAGGCTCGCAAGAAACTGGGACGGTTCAATGCTCTGATAAAGATACTGGTAAAAATGCATCTCAACTAAGTGGGCGGTATGTGGTTAAAGCTTATCAAGAACTCAAAAAAGGAAAGCACATTGTGAAAACCTCGGATCAGAGTTTCATTTGTCCTTACTGCCCTAAAAAGATAGAACGGGGTTATGTGTACAGGGAAATCCTTGAACATGCTACAGGGGTGGGTAAGAGTAGTTCACAAAAGAGAAGTGCCCCAGAGAAGGCTAATCATCTGGCTTTAATGAGATATTTGAAGAAGGATCTTGTTAATGTGGATGGTCCATCAAAACCTATTGATAAAGGTACCAAAATATTAAGCCCAAGAGAAACTGTAATGGATCACTGCTGTAAAAAGGATACTAATATAAGTGCATCTCAAATAAGTGGGTGGTGTGTAGATAAATCTTATGAAGAACTTAAAAAGGGAAATCACAATGTGCAAACCTCAGACAGGACTTTCACGTGTCCATTTCCATACTGCTCTAAAAAGAGAAAACGGGATTATGTGTACAGGGAACTCCTTGAACATGCTTCTGGGGTGGGTCAGAGTAGTTCACAAAAGAGAAGTGCAACAGAGAAGGCTGATCATCTGGCTTTACTAAAATATTTGAAAAAGGATCTGATTTTGATGAATGTGGATGGTCCATCAGAAACTATAAATCCAAACAGTCCTCATGTAAATTCTGAAGAGCAGTTTGTGTGGCCTTGGACTGGGATTGTGGTCAATATTCCCACTAGACAGACAGAAGATGGAAGTTGTGTTGGGCAAAGTGGTTCCATGTTGAGGGATGAATATAGAAGCAGGGGTTTTAATCTACATAGAGTCCGCGCTCTTAGGAATTTACAGGGTCACTCTGGAACTGCACTTGTGGAATTTGATAAAAATTGGCTAGGCTTGGATAGTGCATTGCGATTGGAAAGAACATATGAATTAGATCATCATGGGAAAAAGGACTGGCTTGCCAATACTTGGCAGAAGTCTGGTCTTTATGCTTGGGTTGCACGAGTAGATGACTACAAAATGAACAATATCATTGGGGAACAGCTGCGGAAGATGGGGGATGTCAGAACTATACCTGAACTTATGGAAGAAGAAGCTCGAAAACAAGATAAACTTGTGTACAATTTAACTAACACTATTCAGGTCAAGAATAAGCACTTAAAGGAGATGGAAGTAAAGTGCAGTGAGGCTACACATAGAATGGATATTGTAATGGGGGAAATAGATAAGCTCACTAAATCTCATGGTGAAGAGATGAAGAAAATACAATCAAGTGCAAGGCAATACTTTCAGAGTATTTTTAATGGTCATGAAAGGCTTAAGTTTCAACTGGAATCTCAGAAAAGCAAGCTTGAGTTGTTGAGAATTGAATTGGAAAAGCGCGAGGCACATAATGAAAGTGAAAGAAAAAGGTTGAAAGAAGAGATTGAGGAGAATGCAATGACAAATAGCTCTCTTCAAGTTGCTGCTATGGAGCAACAGAAAGCTAACGAAAATATTGTGAGACTGGCTGCAGATCAAAAGCGGCAAAAGGAACGGCTTCATGCTAAAATTGTCCAGCTTGAAAAACAACTGGATATGAAGCAAAAACTAGAATTGGAGATTCAACAATTAAAAGGAAAACTGAATGTCATGAAGCACCTGGAAGAAGATGGAGATTCTGAAGTTTTGAATAAGATGGATGCTTTATATAAGGATTTAAGAGAAAAGGAACAGTCATTTCGAGAGATAGATACGTTGAACCAAACGCTAATTGTTAAAGAGCGTAAGAGCAATGATGAGCTGCAGGATGCTCGTAAAGTATTGATCAATGTCATTAAAGAGACATGTAGTCGTGCCAATATTGGTGTGAGGAGAATGGGCGAACTTGATATTAGACCATTCCTTGAGGTTATGAGGAAAAAATATAATGAGGAGGATGCAGAAGAGAGAGCTTTAGAACTGTGTTCATTTTGGGAAGAGTATCTTAAGGACCCAGACTGGCATCCATTTAAAATTAGCACAATTGAAGGGAAACATCAGGAAATCATAGATGATGAAGATGAAAGGTTGAAAGGACTGAAAAACGAGATGGGTGAAGGAGTGTATAAAGCTGTGGTGGCAGCCTTGAGAGAGATAAATGAATATAATCCAAGTGGTCGGTATATAACCTCAGAATTATGGAACTATGAAGAAGGAAGGAAGGCTACTTTGCAAGAAGGAGTGCAATATCTATTGAAGCAATGGAGAGTTTATAAACGTGACAGAAGGTGA 3180 0.3915 MLKEAEEEEVLAMLFGSIFKLVCYRYRELTFHHSQEGSPHQNLRIAFVLLVTLVSQARSIIPSPGETVMAQCSNTDTSGSAPQISSWYVDASYEELKKGTHIVKISDETFNCPYCPKRKNGYAYKELLQHASEVCHSSSLKKSAREKANHLALVKYLEKDLVSIDGTSKPVDKGTKVLSLGETAKGHCSDKDTDTSASQISGWYVNKFYKELKNGSHIVKTSDETFACPYCPKSRKQDYMYIQILAHASGVGQSSSQKRSLKEKATHLALMKYLKKDIKIKDVSCPSEPAVKGATTIGSQETGTVQCSDKDTGKNASQLSGRYVVKAYQELKKGKHIVKTSDQSFICPYCPKKIERGYVYREILEHATGVGKSSSQKRSAPEKANHLALMRYLKKDLVNVDGPSKPIDKGTKILSPRETVMDHCCKKDTNISASQISGWCVDKSYEELKKGNHNVQTSDRTFTCPFPYCSKKRKRDYVYRELLEHASGVGQSSSQKRSATEKADHLALLKYLKKDLILMNVDGPSETINPNSPHVNSEEQFVWPWTGIVVNIPTRQTEDGSCVGQSGSMLRDEYRSRGFNLHRVRALRNLQGHSGTALVEFDKNWLGLDSALRLERTYELDHHGKKDWLANTWQKSGLYAWVARVDDYKMNNIIGEQLRKMGDVRTIPELMEEEARKQDKLVYNLTNTIQVKNKHLKEMEVKCSEATHRMDIVMGEIDKLTKSHGEEMKKIQSSARQYFQSIFNGHERLKFQLESQKSKLELLRIELEKREAHNESERKRLKEEIEENAMTNSSLQVAAMEQQKANENIVRLAADQKRQKERLHAKIVQLEKQLDMKQKLELEIQQLKGKLNVMKHLEEDGDSEVLNKMDALYKDLREKEQSFREIDTLNQTLIVKERKSNDELQDARKVLINVIKETCSRANIGVRRMGELDIRPFLEVMRKKYNEEDAEERALELCSFWEEYLKDPDWHPFKISTIEGKHQEIIDDEDERLKGLKNEMGEGVYKAVVAALREINEYNPSGRYITSELWNYEEGRKATLQEGVQYLLKQWRVYKRDRR* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 306 354 - -
Dod08g0797 1059 Gene3D XS domain 534 704 IPR038588 -
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 118 176 - -
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 356 412 - -
Dod08g0797 1059 Coils Coil 746 787 - -
Dod08g0797 1059 CDD RRM_like_XS 541 648 IPR005380 GO:0031047
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 421 469 IPR045177 GO:0080188
Dod08g0797 1059 Pfam XH domain 927 1056 IPR005379 -
Dod08g0797 1059 Pfam XS zinc finger domain 467 508 IPR005381 GO:0031047
Dod08g0797 1059 Pfam XS zinc finger domain 112 154 IPR005381 GO:0031047
Dod08g0797 1059 Pfam XS zinc finger domain 347 389 IPR005381 GO:0031047
Dod08g0797 1059 Pfam XS zinc finger domain 228 270 IPR005381 GO:0031047
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 421 469 - -
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 69 119 - -
Dod08g0797 1059 Coils Coil 813 857 - -
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 118 176 IPR045177 GO:0080188
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 234 293 - -
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 306 354 IPR045177 GO:0080188
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 187 233 IPR045177 GO:0080188
Dod08g0797 1059 Pfam XS domain 538 649 IPR005380 GO:0031047
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 187 233 - -
Dod08g0797 1059 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 470 1058 - -
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 356 412 IPR045177 GO:0080188
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 69 119 IPR045177 GO:0080188
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 234 293 IPR045177 GO:0080188
Dod08g0797 1059 PANTHER RIBONUCLEASE P SUBUNIT P38 470 1058 IPR045177 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0797 Dod-Chr8 9517642 9526397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0797 - - gmx:100790814 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0797 08 9517642 9526397 Dod08g0797 08 9517642 9526397 ECH
Dod04g0256 04 3143210 3147918 Dod08g0797 08 9517642 9526397 PCT