Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0347 ATGGCTACCACATACAAGCCAAAGAACATTCTCATTACTGGTGCTGCTGGCTTCATTGCATCACATGTATGCAACAGACTAATTCGGAACTACCCTGATTACAAGATTATTGTCCTCGACAAGCTTGATTATTGTTCAAATCTCAAGAATCTCATTCCCTCACGTTCCTCTCCAAATTTCAAGTTCATAAAGGGAGATATATGCAGTGCTGACATTGTTAACTACATCCTTCTCACTGAGTCCATTGATACCATAATGCATTTTGCAGCACAGACACATGTTGACAACTCTTTTGGCAATAGCTTGGAATTCACTCAGAACAACATTTATGGAACACATGTGCTTCTAGAAGCATGCAAAGTCACTGGTGGCCAAGTAAAGAGGTTTATCCATGTGAGCACAGATGAAGTCTATGGGGAGACAGATGAGGATGCAGTGGTTGGAAACCATGAGGCTTGTCAGCTTCTCCCAACTAATCCTTATTCTGCTACAAAAGCAGGTGCTGAAATGCTTGTGATGGCATATGGTAGGTCCTATGGATTGCCTGTTATAACCACAAGAGGGAACAATGTTTATGGGCCTAACCAGTTTCCTGAGAAGCTGATTCCAAAGTTTTTGCTATTGGCCATGAATGGTAAGACTCTACCAATTCATGGGGATGGATCAAATGTTAGGAGTTATCTCTATTGTGAAGATGTTGCTGAGGCCTTTGAGGTCATTCTCCATAAAGGTGAGGTAGGACATGTTTATAACATTGGGACAAAGAAAGAGAGGAGAGTGATTGATGTGGCAAGGGACATTTGCAACCTTTTCTCTTTGGATCCAAATACACATATCAAGTTTGTGGAGAATAGGCCTTTCAATGACCAGAGATACTACTTGGATGATCAGAAGCTGAAGAGTTTGGGATGGTTTGAGAGAACTACTTGGGAGGAGGGTCTAAGGAAGACCATGGATTGGTATGTTAAGAATCCTGATTGGTGGGGAGATGTTTCTGGGGCTTTGATTCCTCATCCAAGGATGTTGACTATGCCAGGAGTTGAGAAGAATAATGGCCAAGATATGAACAAAGTTAATGCTTCTTCTGTTGCTGTAAACAATTCTAGTCAGAATAGAATGGTGGTGGCAACTCCAAGGAATAACAATTTGTCTGCTCAGAAACCATCATTGAAATTCCTGATATATGGTGGCGGAGGGTGGATTGGGGTCCTTCTTGGGAATATTTGTCAGAAGCAAGGAATACCCTTTGAGTTTGGAAGGGGGAACTTAGATGATAGATCACAACTGTTGGTTGATATTCAGAACATTAAACCAACTCATGTTTTCAATGCTTCTGGTGTCACTGGTGCATTGAATTTGAAATGGTTTGAGGCTCACAAAATAGAAACTATCCGTGTCATTTTTGTTGGTGTGTTAACATTGGCTGATGTTTGCAAGGAGCATGGTCTCCCCATGGTGAATTATGCCTTTGGTGGCAATTTTGAAGACAAACCAAATTCAAGTGATTCTTTCTACTCTAAGACACAAGCCAAGGTTGAAGAGCTTCTAAAGGATTATGATAATGTATGCACCCTCAAAATCCAGTTTCCAGTATCTTCTGATCTCAGCAATCCACACAACTTTATCACTAAGATGGCAAGATCTGATAAAGTGGCTAACATTCCTGCTACCATTAGTGTTTTGGATGAACTTTTGCCAATTTCAATTGAGATGGCCCAAAGAAATTGCAAAGCTGTTTGGAACCTCACAAATCCTGATACTGTGACATGCAATGAGGTTCTTGAGATGTACAAGAATTACATTGACCCTAGTCTGAAGTGGATCAATTTTACACCTGAACAAGAGGCTCAATTCCCTTCTCAAAGCATCAATGAATTGGATGCATCAAAATTGAAGAAGGAATTTCCTGAGCTACTGCATGTGAAGGACTCATTGATTAAATATGTGTTTGAGCCAAAAAAGAAAAGCTTTGTGCATTGA 1980 0.4051 MATTYKPKNILITGAAGFIASHVCNRLIRNYPDYKIIVLDKLDYCSNLKNLIPSRSSPNFKFIKGDICSADIVNYILLTESIDTIMHFAAQTHVDNSFGNSLEFTQNNIYGTHVLLEACKVTGGQVKRFIHVSTDEVYGETDEDAVVGNHEACQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFLLLAMNGKTLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTKKERRVIDVARDICNLFSLDPNTHIKFVENRPFNDQRYYLDDQKLKSLGWFERTTWEEGLRKTMDWYVKNPDWWGDVSGALIPHPRMLTMPGVEKNNGQDMNKVNASSVAVNNSSQNRMVVATPRNNNLSAQKPSLKFLIYGGGGWIGVLLGNICQKQGIPFEFGRGNLDDRSQLLVDIQNIKPTHVFNASGVTGALNLKWFEAHKIETIRVIFVGVLTLADVCKEHGLPMVNYAFGGNFEDKPNSSDSFYSKTQAKVEELLKDYDNVCTLKIQFPVSSDLSNPHNFITKMARSDKVANIPATISVLDELLPISIEMAQRNCKAVWNLTNPDTVTCNEVLEMYKNYIDPSLKWINFTPEQEAQFPSQSINELDASKLKKEFPELLHVKDSLIKYVFEPKKKSFVH* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0347 659 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM1-LIKE 1 655 - -
Dod08g0347 659 Gene3D - 380 659 - -
Dod08g0347 659 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 390 633 IPR036291 -
Dod08g0347 659 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 334 IPR036291 -
Dod08g0347 659 Gene3D - 202 324 - -
Dod08g0347 659 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 655 - -
Dod08g0347 659 Pfam GDP-mannose 4,6 dehydratase 11 317 IPR016040 -
Dod08g0347 659 Gene3D - 10 315 - -
Dod08g0347 659 CDD dTDP_GD_SDR_e 8 326 IPR005888 GO:0008460|GO:0009225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0347 Dod-Chr8 3790273 3793028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0347 9 322 Miscellaneous Gene Families AT3G23820 27.381 1.04e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0347 K12450 - gmx:100810341 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0347 08 3790273 3793028 Dod08g0347 08 3790273 3793028 ECH