Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0343 ATGGGTGTCCTTGTAGCAATGGCAAAACATCTGGATACAATAATGGGGCCTGGAGTAATGCTTCTTTTTCCCCTATACGCTTCAATGAGGGCAATTGAGAGTCCTTCAACTTTAGATGATCAACAGTGGCTAACGTATTGGGTTTTGTACTCCTTCATGACCCTCTTTGAGCTTTCATTTTATAAGGTCCTATCTTGGTTTCCTTTTTGGCCATACATGAAGCTTGTGTTTTGCCTCTGGCTGGTACTGCCAATGTTCAATGGAGCAGCTTACATATATGAGAATTTTGTGAGGAAATACATCAATATAAGCTATGGAGATTATAATTATTCCATGAAGCACAAGAAAGCCCTTCAGATGATGAGCTTCGATGCAAGGAGAGCAGTTGAAAGCTATATCGATAGATATGGCCCTGATGCCTTTGAGAGAGTAATCAATGCGAATAACTATCCTGGAAACTCTTGTTTAATTGAATGA 477 0.3983 MGVLVAMAKHLDTIMGPGVMLLFPLYASMRAIESPSTLDDQQWLTYWVLYSFMTLFELSFYKVLSWFPFWPYMKLVFCLWLVLPMFNGAAYIYENFVRKYINISYGDYNYSMKHKKALQMMSFDARRAVESYIDRYGPDAFERVINANNYPGNSCLIE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0343 158 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Dod08g0343 158 PANTHER HVA22-LIKE PROTEINS 3 147 IPR004345 -
Dod08g0343 158 PANTHER HVA22-LIKE PROTEIN 3 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0343 Dod-Chr8 3735363 3737028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0343 K17279 - gmx:100779435 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0299 05 3758559 3760966 Dod08g0343 08 3735363 3737028 PCT
Dod09g1252 09 33612017 33613862 Dod08g0343 08 3735363 3737028 PCT