Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0306 ATGGAGAATACTGGTGGTGGTGCCCTTTTGAGGAATAGAACGCTGGAGAGCTTCTTGGTGGATACAAGCTCTGGCCAAAGGGTGGCAGAAACCCCAAAAATTTTGGTGAAGGACAAATCAGGACAACGGCCAAGGAAGGATGTCTATGCAGATGATGATGGGTGGGTTTCGACAATCATATCGTGGATAAGAATTGTCACATGTTTTGTGTCTATGATGGTCACTACATTCATTTGGGCGTTGATCATGGTTGTACTTATACCATGGCCCTATGAGAGGATTAGACAAGGGAACATTTATGGCCATGTGACTGGTAGAATGCTGATGTGGATTCTTGGTAATCCTATAAAGATTGAAGGTGCTGAGTACAGTAATGAGAGGGCCATTTACATCAGCAATCATGCATCTCCAATAGACATATTTCTTATAATGTGGTTGACTCCTACAGGCACTGTTGGCATTGCCAAGAAAGAGATAATATGGTATCCTCTATTTGGGCAACTATATGTTTTGGCCAACCATCTTCGTATAGACCGGTCCAATCCAACAGCAGCTATTGAGTCCATGAAAGAGGCAGCTCGTGCAGTTGTGAGAAACAATCTGTCCCTGATAATTTTTCCTGAGGGTACCAGGTCAAAGAACGGACGACTACTTCCTTTCAAAAAAGGTTTTGTGCATTTAGCACTGCAAACGCGCCTTCCTATCGTTCCGATGGTCCTGACAGGTACTCATCATGCATGGAGGAAAGGCAGTTTACATGTTCGACCGGCGCCTCTTACGGTCAAGTATCTTCCCCCTATCAGTACTGAAAATTGGAAAGTTGACAAGATTGATGACTATGTTCAAATGGTGCATAATTTGTATGCTGAACAGCTCCCTCAGACTCAAAGGCCTCTACCTTGA 903 0.4396 MENTGGGALLRNRTLESFLVDTSSGQRVAETPKILVKDKSGQRPRKDVYADDDGWVSTIISWIRIVTCFVSMMVTTFIWALIMVVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYSNERAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNPTAAIESMKEAARAVVRNNLSLIIFPEGTRSKNGRLLPFKKGFVHLALQTRLPIVPMVLTGTHHAWRKGSLHVRPAPLTVKYLPPISTENWKVDKIDDYVQMVHNLYAEQLPQTQRPLP* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0306 300 CDD LPLAT_AGPAT-like 106 278 - -
Dod08g0306 300 Pfam Acyltransferase 116 240 IPR002123 GO:0016746
Dod08g0306 300 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 59 296 - -
Dod08g0306 300 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 125 240 IPR004552 GO:0003841|GO:0008654|GO:0016020
Dod08g0306 300 SMART plsc_2 128 243 IPR002123 GO:0016746
Dod08g0306 300 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 36 296 - -
Dod08g0306 300 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 36 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0306 Dod-Chr8 3216966 3220426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0306 65 251 Acyl Lipid Metabolism Gene Families AT4G30580 31.472 1.05e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0306 K13509 - pvu:PHAVU_006G042300g 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0306 08 3216966 3220426 Dod08g0306 08 3216966 3220426 ECH