Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0297 ATGGCGTCGTGGTGTGCTGCCAGGTGCTTCCAGATTCCGGCCATGGACGCCGCCGCCCTCCGCAGCCGCGCCTCACTCGCCACCGCCGCCGGCGTTGGCTGCGTCTCCGTGGTCGGCACCTCCTTCTGGCGCTCATCCAAATCCAACCGCACTTTGCCTTTCACTTGCTTAAGCATCTCCACTGATGCCAGTATCAAGGAAGCTGTTCAGACTGAAAAGGCCCCTGCTGCATTGGGTCCATATTCCCAAGCAATCAAATCCAACAACCTTCTGTTTGTTTCGGGTGTTCTTGGCCTTGTTCCTGAGACAGGGAAGTTTGTCTCTGATAATGTTGAAGATCAGACAGAGCAGCTCCTAAAAAATATGGGTGAAATCCTTAAAGCTGGCGGTGCCAGCTATTCATCAGTTGCTAAGACAACAATTATGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCCGCTCCAGCTCGTTCCACATATCAGGTAGCCGCCTTGCCATTGGATGCTAAGATCGAAATTGAGTGCATAGCAACACTATAA 570 0.5088 MASWCAARCFQIPAMDAAALRSRASLATAAGVGCVSVVGTSFWRSSKSNRTLPFTCLSISTDASIKEAVQTEKAPAALGPYSQAIKSNNLLFVSGVLGLVPETGKFVSDNVEDQTEQLLKNMGEILKAGGASYSSVAKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIEIECIATL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0297 189 ProSitePatterns Uncharacterized protein family UPF0076 signature. 165 183 IPR019897 -
Dod08g0297 189 Pfam Endoribonuclease L-PSP 72 188 IPR006175 -
Dod08g0297 189 PANTHER PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN 1 189 - -
Dod08g0297 189 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 66 188 IPR006056 -
Dod08g0297 189 SUPERFAMILY YjgF-like 66 189 IPR035959 -
Dod08g0297 189 CDD YjgF_YER057c_UK114_family 81 187 - -
Dod08g0297 189 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 1 189 IPR006175 -
Dod08g0297 189 Gene3D - 63 189 IPR035959 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0297 K09022 - gmx:100527559 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0297 08 3154094 3156656 Dod08g0297 08 3154094 3156656 ECH