Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0278 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGCCGTCCATCGAAGGCGGATCTGGAGCAGCGGCGGCAGCGCTCCAACAACGGGGAGTCTCCGGCGAGGTCTCAGCCTGATTTACGGCGGAGCCGCCGGCGGCGGAACGTTAGGTACAACATCGATTATGACGATTACATCGATGAGGAAGATGAGGATGAGGATGGAGATGAAAGGAGGCGCGAGAAAAAGAAGCTGAAGCTCGTGGTGAAGCTGAACCAGGGAACCGAAGAGGAAGAAGAAGAAGACGAAGAAGAAAACGAAAACAACGAGTCCGTAAATGTGAAGAATCGCACGCGCGTTGTGTCACGTGGGGTGCACGCGCTCGAGAATGGTGGTAGGGATGAGGAAGAGGAGGATGAAGGAGGTGAAGAGGGTGGTGAAGAAGAAGAAGATGACGAAGGGAATGAGGATGCTGAGGAACACGAGAACAATGAAGAAGAAGAAGAAAATGAAGAAGAACGTGAAGTGGGTGAGGTAAAGGGCAGAAAAGTGGATTCCAAAGGGCTCCACTCTGTTTCAGGGACTCCTTCGAAGCTTCTTCCATCTGGGATTCCGTTGCCTGATAAGAGGAGCCTCGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACATATGGTGTGTATGCGGAGCCTGTTGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCTATGGACTTTGCCACAGTGAGGAAGAAGTTGGCAAATGGATCTTATCCTACCTTGGAACAATTTGAGGGTGATGTATTTTTGATTTGCTCAAATGCAATGCAATATAATGCACCAGAGACCATATACCACAAACAGGCACGATCAATACAAGAACTAGCACGGAAAAAGTTTGAGAAGTTAAGAATTGACTTTGAACGCTCTCAAAATGAGCTTAGATCCGAACAAAAAACGAGATCTAACTACTTGGTTAAGAAGCTAGCAAAGAAGCCACTGGGTCATGCTTCACAGGAACCTGTTGGCTCTGATTTCTCCTCAGGTGCAACACTTGCTACTACTGGAGATGTACAGCCAACTTCCCATCCAATGCAAGGTGTCATTTGTGAAAGGCCTGGCCATATTGATGGCCTTGTGGAGGGCAATGCATTCTTGATTGATGCAAATCAAGATAAAGCAGAAGACTTCATATCAGGGAAGGGTCTGCTTTCCAAGCTGGGAAGGAAGTCATCTGTGCAAGATTATGAACGTCGTGCAACTTATAATACGTCTAATATACCAATTACTAGATCAGATTCAATATTTTCGACATTTGAGAGTGAAATTAAGCAGTTGGTTACTGTTGGACTTCAAGCAGAATATTCCTATGCTAGGAGTTTGGCTCGTTTTGCCGCAACTTTAGGACCCACCGCATGGAGGATTGCTTCCCAGAGGATTCAACAGGCACTGCCTCCTGGCTGTAAATTTGGTCATGGTTGGGTAGGAGAGTATGAACCACTTCCAACGCCAGTATTAATCCTTGATAAACGCATCCAGAAAGGGCCTAGTTTCCCTGATAACCGCATCCAGAAAGAGCCTTGTTTCCCTGATAACCGCATCCAGAAAGAGCCTAATTCCTTTGATAATCGCATCCAGAAAGAGCCAAGTTTGGTACCGAAGGTGCAGTCTACTACTGAATCAATAAAGGTTCACAAAAACTGTAAGAATGTGGAAGCCATTAGGGAACGTCCTGTTAAGGGACCAATCCTTGAGGGAAAACAACCTTCCTCGCATCCTGGTAGTGTGCCTACATCAGAAGGAAAACCGTCTTTGTTTGGTTCTGCTGGAGTAAGACCCAATGGTCCCGTCAATCTCTTTTATCAGCAACCCAATGTTCAATCCAGGAATCCCAGCAAGTCTGAGAACAAGGGTTTGAAACAAGTGGAGTTAAACTCCCTTCCCCCCAGTGATCAGAATAATGCGAGTCTAGTGGCAAAGCTTACAAGTAATGCTCCTGCAGCAGGGTGTAAGCCCAGAGAGATGGTACCAAGTAACATGAATATTTTGCCATCTATACCTTTCACGCAGCCAGATACTAACGGAGTTGTTAGTGGAGAGTTGCCTAATGGAAAAGTGCGGAATAATAGTTTGAATAGGCGGATGACTGGTCCATCACCCGAAAGTACATCAAATCAAACAGGTAGAGGAGCTCCGTTTGTTGCCCATGGGCAAGAGCAGTCTCTCACTGACCCAGTTCGGCTGATGAGGATGTTAGCCGAAAAATCTCAGAAGCAACAGACTTCAAGTTCTTCTAATCATTCGCCTGTTGACACTCCACCAGTTACACCATCGGTTCAATCAGGACGGAGGGAGGACTCGAGCAATGCTTCAGCAGCAGCTGCCCGTGCATGGATGTCTGTAGGGTCAGGAGGATTTAAACAAGCGCCCGAAAATTCTAGTTCACCCAAAAATCAAATTTCTGCAGATTCATTGTACAACCCAGCGCGAGATTTCAATCAGCATGTGTATCAAATTCCTCCTGGTGGAATGCCTTTCCAGTCTGAGAAGAACAATTTTCCATTTCAGGCTCTTGCATCTCAACCTATTCATGCCGTTGGTGTTTCACATTTTCCAAACCGACCGATGGTTTTCCCTCAAGTAGCAGCACCAACTGACCTATCAAGATTTCAAATGCAGCCACCTTGGCGAGGTGTCCGGCCTCCTAGTCAACCAAGACAGAAACAGGAAACACTTCCTCCGGACTTGAATATTGGTTTCCAATCTCCTGGTTCGCCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCGCAGCAACCAGACCTGGCTTTGCAACTGTGA 2826 0.466 MGQIVRRKKKGRPSKADLEQRRQRSNNGESPARSQPDLRRSRRRRNVRYNIDYDDYIDEEDEDEDGDERRREKKKLKLVVKLNQGTEEEEEEDEEENENNESVNVKNRTRVVSRGVHALENGGRDEEEEDEGGEEGGEEEEDDEGNEDAEEHENNEEEEENEEEREVGEVKGRKVDSKGLHSVSGTPSKLLPSGIPLPDKRSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFEGDVFLICSNAMQYNAPETIYHKQARSIQELARKKFEKLRIDFERSQNELRSEQKTRSNYLVKKLAKKPLGHASQEPVGSDFSSGATLATTGDVQPTSHPMQGVICERPGHIDGLVEGNAFLIDANQDKAEDFISGKGLLSKLGRKSSVQDYERRATYNTSNIPITRSDSIFSTFESEIKQLVTVGLQAEYSYARSLARFAATLGPTAWRIASQRIQQALPPGCKFGHGWVGEYEPLPTPVLILDKRIQKGPSFPDNRIQKEPCFPDNRIQKEPNSFDNRIQKEPSLVPKVQSTTESIKVHKNCKNVEAIRERPVKGPILEGKQPSSHPGSVPTSEGKPSLFGSAGVRPNGPVNLFYQQPNVQSRNPSKSENKGLKQVELNSLPPSDQNNASLVAKLTSNAPAAGCKPREMVPSNMNILPSIPFTQPDTNGVVSGELPNGKVRNNSLNRRMTGPSPESTSNQTGRGAPFVAHGQEQSLTDPVRLMRMLAEKSQKQQTSSSSNHSPVDTPPVTPSVQSGRREDSSNASAAAARAWMSVGSGGFKQAPENSSSPKNQISADSLYNPARDFNQHVYQIPPGGMPFQSEKNNFPFQALASQPIHAVGVSHFPNRPMVFPQVAAPTDLSRFQMQPPWRGVRPPSQPRQKQETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0278 941 MobiDBLite consensus disorder prediction 67 85 - -
Dod08g0278 941 Coils Coil 295 315 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 693 735 - -
Dod08g0278 941 ProSitePatterns Bromodomain signature. 217 273 IPR018359 -
Dod08g0278 941 Coils Coil 88 108 - -
Dod08g0278 941 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 941 - -
Dod08g0278 941 Coils Coil 142 169 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 124 165 - -
Dod08g0278 941 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 941 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 568 633 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 330 360 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 613 633 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 749 783 - -
Dod08g0278 941 PRINTS Bromodomain signature 228 244 IPR001487 GO:0005515
Dod08g0278 941 PRINTS Bromodomain signature 244 262 IPR001487 GO:0005515
Dod08g0278 941 PRINTS Bromodomain signature 262 281 IPR001487 GO:0005515
Dod08g0278 941 MobiDBLite consensus disorder prediction 1 197 - -
Dod08g0278 941 ProSiteProfiles Bromodomain profile. 211 281 IPR001487 GO:0005515
Dod08g0278 941 Gene3D - 137 319 IPR036427 GO:0005515
Dod08g0278 941 MobiDBLite consensus disorder prediction 749 818 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 511 533 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 12 26 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 801 818 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 693 726 - -
Dod08g0278 941 CDD Bromodomain 199 295 - -
Dod08g0278 941 Pfam Bromodomain 205 285 IPR001487 GO:0005515
Dod08g0278 941 SMART bromo_6 192 300 IPR001487 GO:0005515
Dod08g0278 941 MobiDBLite consensus disorder prediction 887 941 - -
Dod08g0278 941 MobiDBLite consensus disorder prediction 336 357 - -
Dod08g0278 941 SUPERFAMILY Bromodomain 191 298 IPR036427 GO:0005515
Dod08g0278 941 MobiDBLite consensus disorder prediction 899 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0278 Dod-Chr8 2980350 2986377 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0278 K22184 - gmx:100799986 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0911 05 16991001 16995740 Dod08g0278 08 2980350 2986377 PCT