Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0253 ATGAAGAAAGGCAGAGTAGTTGAAAAGAGCACCTGGTCTTTCACACAATGCTGCATTGCTTTACTCTTTCTTATCACAATATCATCCCTCACATGTTGTGCTTGTGATGAGTCCTTCAACTATGGCCAAGCCTTGTCCCAGAGCCTCTTCTACTTCGAGTCACAGCGTTCAGGTCGCTTACCCCACAATCAAAGGGTCACATGGCGTCACCATTCTGCCCTCACCGATGGCCTTGAACAAGGGGTGGACTTAGTAGGAGGGTACTATGATGCAGGGGACAATGTGAAATTTGGGCTACCAATGGCATTCACCATAACCATGCTCTCATGGGGTGCCATTGAATACGGCGACCAACTCGCCGCCGCTGGCGAGTATGCTCACGCGCTTGAGGCCATCAAGTGGGGCACTGATTATTTCGTCAAGGCTCACACACAACCAAATGTTCTCTGGGTAGAGGTTGGTGATGGGGATACTGATCACTACTGTTGGCAGCGGCCGGAGGACATGACAACATCACGGCGGGCTTATAAGGTTGATGTTAACAACCCTGGCTCGGATGTCGCCGGCGAGACGGCGGCGGCGTTGGCGGCGGCTTCTATTTTGTTTAGGAGAACAAACCCACGTTACTCTCAACTACTTTTGCATCATGCACAACAGTTGTTTGAGTTTGGGGACAAGTACAAGGGCAGGTATGATGAGAGTGTTGGAGTGGCTAAAGGGTATTATGCTTCTGTTAGTGGGTACATGGATGAGTTGCTTTGGGCAGCCATTTGGCTATATAGGGCCACTCAAAAGGAGGAATATTTGAGTTATTTATTGGAGAATGCCTATGACTTTGGTGGGACCACTTGGGCTATGACTGAATTTAGCTGGGATGTCAAGTACGTTGCTGTACAAGCCATTGCTTCAATGAATCAATGGAAATTGGCGGAGCACGGCTGA 942 0.4915 MKKGRVVEKSTWSFTQCCIALLFLITISSLTCCACDESFNYGQALSQSLFYFESQRSGRLPHNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGAIEYGDQLAAAGEYAHALEAIKWGTDYFVKAHTQPNVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDVNNPGSDVAGETAAALAAASILFRRTNPRYSQLLLHHAQQLFEFGDKYKGRYDESVGVAKGYYASVSGYMDELLWAAIWLYRATQKEEYLSYLLENAYDFGGTTWAMTEFSWDVKYVAVQAIASMNQWKLAEHG* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0253 313 SUPERFAMILY Six-hairpin glycosidases 38 304 IPR008928 GO:0005975
Dod08g0253 313 Gene3D - 37 311 IPR012341 GO:0005975
Dod08g0253 313 PANTHER ENDOGLUCANASE 10 304 - -
Dod08g0253 313 Pfam Glycosyl hydrolase family 9 41 303 IPR001701 GO:0004553|GO:0005975
Dod08g0253 313 PANTHER ENDO-1,4-BETA-GLUCANASE 10 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0253 Dod-Chr8 2782381 2784820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0253 16 304 Glycoside Hydrolase AT2G32990 73.810 3.29e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0253 - - gmx:100786912 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0253 08 2782381 2784820 Dod08g0253 08 2782381 2784820 ECH