Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0247 ATGGAGTTCGACGCGATCCCATTCGGTTCGTGCTCCAAAGAGCACCAGACGATCTACCAGGAATGGTTCAATTACGCTGATTCAGATGGCGATGGCCGCATTACAGGTAGTGATGCCACCAAGTTTTTCGCAGTGTCCAATTTGTCTCGCCAAGATCTTAAGCAGGTGTGGGCTATTGCAGATTCTAAGCGACAAGGATATCTTGGTCTCAAAGAGTTTATCATTGCTATGCAGCTAGTTTCCTTGGCACAATCTGGGCAACCAATAACACATGATCTTCTCACTAGTGGTGTTGATTTGACAAATCTGAAACCTCCTGCAATGGAGGGTTTGGATGAATTACTAGCTAAGAAGAGGCATAAACAAAAGGAGGTTGATTCAAATGGTAGTTCTCAATTGCAGCCATCACCATCAACAAGTAGCTGGTTTTCTTCAAAGTCAGTGAAAAAG 450 0.44 MEFDAIPFGSCSKEHQTIYQEWFNYADSDGDGRITGSDATKFFAVSNLSRQDLKQVWAIADSKRQGYLGLKEFIIAMQLVSLAQSGQPITHDLLTSGVDLTNLKPPAMEGLDELLAKKRHKQKEVDSNGSSQLQPSPSTSSWFSSKSVKK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0247 150 Gene3D - 10 109 - -
Dod08g0247 150 PANTHER EH DOMAIN 18 150 - -
Dod08g0247 150 MobiDBLite consensus disorder prediction 127 150 - -
Dod08g0247 150 CDD EH 19 85 IPR000261 GO:0005515
Dod08g0247 150 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Dod08g0247 150 SMART eh_3 12 103 IPR000261 GO:0005515
Dod08g0247 150 ProSiteProfiles EH domain profile. 15 104 IPR000261 GO:0005515
Dod08g0247 150 MobiDBLite consensus disorder prediction 119 150 - -
Dod08g0247 150 Pfam Cytoskeletal-regulatory complex EF hand 19 80 IPR000261 GO:0005515
Dod08g0247 150 SUPERFAMILY EF-hand 12 87 IPR011992 -
Dod08g0247 150 PANTHER EH DOMAIN-CONTAINING PROTEIN 1-LIKE 18 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0247 Dod-Chr8 2727717 2729005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0247 1 143 EF-hand Containing Proteins AT3G20290 61.111 1.34e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0247 K12483 - lja:Lj2g3v3209600.1 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0247 08 2727717 2729005 Dod08g0247 08 2727717 2729005 ECH