Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0245 ATGACAGATAAACAACTTTCAGAGGTACTTAAAAAGTTTGGTGTTGAAAGATTCGATCCTACGAATGAGCCATTTGATCCCCACAGGCATAATGCTGTCTTCCAAGTCCCTGATGGTTCCAAGCCCCCAGGCACTGTTGCTGCTGTTTTGAAGGCAGGATATGTGCTTTATGATCGTGTTATTCGTCCAGCCGAAGTTGGTGTAACCCGAGCCATGGAGGAGGATAACAACGCAGTAGAATGA 243 0.4568 MTDKQLSEVLKKFGVERFDPTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKAGYVLYDRVIRPAEVGVTRAMEEDNNAVE* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0245 80 Pfam GrpE 1 69 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Dod08g0245 80 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 15 70 IPR009012 GO:0006457
Dod08g0245 80 CDD GrpE 1 68 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Dod08g0245 80 Gene3D Head domain of nucleotide exchange factor GrpE 14 70 IPR009012 GO:0006457
Dod08g0245 80 ProSitePatterns grpE protein signature. 25 68 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Dod08g0245 80 PRINTS GrpE protein signature 22 37 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Dod08g0245 80 PRINTS GrpE protein signature 49 68 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Dod08g0245 80 PANTHER GRPE PROTEIN HOMOLOG 1 75 - -
Dod08g0245 80 PANTHER GRPE PROTEIN 1 75 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0245 K03687 - gmx:100803396 139.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0245 08 2700532 2701721 Dod08g0245 08 2700532 2701721 ECH