Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0244 ATGCTCCCATCAAGGGTTAAAGAATATTTTTGGGTCATCGAACACGTACAGAAATTGTACACAAACCAATTGGGAATAACTCGAGAATCAAACCAAAATTATGACGATACATTAGTAGAAAGGCTAACTAGAAGTGCTAACATTGTTGATGTACGTTGGATACGATACTATTGTACTGTCCTCCCAGCATCCATGGAGCTGTGCACACGAACCTTAACAAATCTCAACCCTTCTTTATCACTTCTTTCTTCAAACTCTCTTCTTCTTCTTCATCGTGCTACAACTTCTTCTATTACACCCTTTAAACTCAACAACTCCTTCAAGCTCTCATCATCATCTCATAATGTTCACCACCACTTTCAACCCGTTATCTATCATCATCATCATCATCATCACAATTCTTCTCCCTTCACAGTCTCAGCTTCTTCTTCATCTTCTTCTTCGGTTGCTGTTGGCACAGAAAAGGACCGTCTTCCAGCAGACTTAAAGGTCACCGAAACACAGGAGCCCAACTCCAGAGTTAGACTGCATGTGGAGGTGCCACCACCGGTTTGCGAGGATTGTTACAAAAGGGTTATATCTGAGTTTACAAAGCAAGCAAAGGTGCCTGGATTTCGCCCTGGAAAGAAGGTTCCAGAAAGTATTCTCGTTGGTTTTGTTGGGACTAAAAATGTTCAGAAGGCTACGATTGAATCTATATTGAGGAGAACACTTCCCCACGCCATGGAATCTGTCACTGGAAAGACTTTGCCAGACTCTGTGCGTATAGTGACTAAATTTTCTGAGATGGAGCAAACATATTCTTCTCTCGGGTCTCTTAGATATGATGTCATTGCAGATATCATACCTGAAATCAAATGGATTCCTGATAACGCATACAAGAATTTAAAAATTGTTGTTGAAATAGACAGAGATATTGATGCTTGCATAGCATCCGAACAAGAATTTAGAAGACGTTACAAGTCCATTGGTGCGCTGAAAGTTGTTGCTGACAGGGGGCTACAGGTTGGTGATGTTGTTGTACTCGACATCTCAGCAACAACCATTGATCAAGATGAGTCAAATATTAAAGATATTCCTTCTGCTGAAAGTAAAGGATTTAATTTCGATACAGAAGATGGTGACAAAGTATTGCCTGGTTTCCTTGATTCTATAATTGGAATTCGTCCAGGCGAAACAAAGTCATTTCCTCTTGTATTTCCCGAAACTTGGAAGCAAGAAAATCTTTGTGGTGTTCATGCTCAGTTCACTGTTGAATGCAAAGAACTTTTTTACCGAGATTTGCCGGAGCTGGATGATTCTATTGCTGATAAGCTTCTCCCTGGATGCACCACAGTGGAACAGGTGAAAGACCTATTGTTGCAGAGATGCCTAGAGGTGGAGCAAACAGCTAAAGAACAAGCAACTGATAATGCTATCTTAGATCAAATTTCTAAGATGGTGGAAGTTGATATACCACAATCCTTGTTTGAAGAACAAGGCAGGCAGCTTTATGCAGCCAACCTATTAGAAATACAGGCAAAAGTAAAACTAAACGAGCAGCAGTTGGCGTCTCTATCGAGTCCGAAGGCTGTGAATGAATATCTTGAGCATCAGAAGGACAATATAAAAAATTTGATAAAACAGAATTTGGCGGTCGGTGATATATACAGGCGTGAGAATCTGCAGTTTTCTACTGAGGAACTCGTGAAAGAGGTCGAGAATTCCATCGCTGAATTCAAACGTCAAAACCAAGAATATGATGAGGAGCGGGTGAAGGAACAGGTCCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACACGCAGAGATTCAATATGTAACCAGATGA 1842 0.4077 MLPSRVKEYFWVIEHVQKLYTNQLGITRESNQNYDDTLVERLTRSANIVDVRWIRYYCTVLPASMELCTRTLTNLNPSLSLLSSNSLLLLHRATTSSITPFKLNNSFKLSSSSHNVHHHFQPVIYHHHHHHHNSSPFTVSASSSSSSSVAVGTEKDRLPADLKVTETQEPNSRVRLHVEVPPPVCEDCYKRVISEFTKQAKVPGFRPGKKVPESILVGFVGTKNVQKATIESILRRTLPHAMESVTGKTLPDSVRIVTKFSEMEQTYSSLGSLRYDVIADIIPEIKWIPDNAYKNLKIVVEIDRDIDACIASEQEFRRRYKSIGALKVVADRGLQVGDVVVLDISATTIDQDESNIKDIPSAESKGFNFDTEDGDKVLPGFLDSIIGIRPGETKSFPLVFPETWKQENLCGVHAQFTVECKELFYRDLPELDDSIADKLLPGCTTVEQVKDLLLQRCLEVEQTAKEQATDNAILDQISKMVEVDIPQSLFEEQGRQLYAANLLEIQAKVKLNEQQLASLSSPKAVNEYLEHQKDNIKNLIKQNLAVGDIYRRENLQFSTEELVKEVENSIAEFKRQNQEYDEERVKEQVQEILEGAKVLEWLREHAEIQYVTR* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0244 613 Hamap Trigger factor [tig]. 162 609 IPR005215 GO:0015031
Dod08g0244 613 Gene3D - 322 429 IPR046357 GO:0003755
Dod08g0244 613 SUPERFAMILY FKBP-like 328 432 - -
Dod08g0244 613 SUPERFAMILY Trigger factor ribosome-binding domain 162 300 IPR036611 GO:0006457|GO:0015031
Dod08g0244 613 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 146 612 IPR005215 GO:0015031
Dod08g0244 613 Coils Coil 563 590 - -
Dod08g0244 613 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 431 611 IPR027304 -
Dod08g0244 613 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 146 612 - -
Dod08g0244 613 Gene3D - 160 285 IPR036611 GO:0006457|GO:0015031
Dod08g0244 613 Pfam Bacterial trigger factor protein (TF) C-terminus 445 602 IPR008880 GO:0006457|GO:0015031
Dod08g0244 613 Pfam Bacterial trigger factor protein (TF) 163 300 IPR008881 GO:0006457|GO:0015031
Dod08g0244 613 Gene3D - 293 608 IPR037041 GO:0006457|GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0244 K03545 - gmx:100812597 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0244 08 2692229 2698973 Dod08g0244 08 2692229 2698973 ECH