Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0242 ATGGCAGTGACAGAAGCTCAAAATCCTCTTCTTGGAGAGCAAACCTGTGGTTCCTTGTTAAAGAAGCTGCAGGAAATATGGGATGAGGTCGGAGAGAGTGACGAGCAGCGCGACAAGATGCTTCTTCAGTTAGAGCAGGAGTGCTTGGATGTGTACAGGAGAAAGGTTGAGCAGGCTGCGAAGTCAAGGGCGCAGCTACTTCAAGCCTTGTCTGATGCTAAGCTTGAGCTTTCTAGTCTTCTATCAGCTCTTGGGGAAAAAAGCTCTGCTGGAATTCCTGAAGACACTTCTGGAACAATCAAGGAGCAGCTTGCTGCTATTGCACCAATACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATAAAGGAGTTCTCAGATGTGCAGTCACAGATCCAAAAAATATGTGGCGAGATAGCTGGCAGCTTGAATCTTAGTGACGATCCACCTGCAGTTGATGAGTCTGACCTGTCTCTGAAGAAGTTAGATGAATATCAATCTGAATTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGGCTGCACAAGGTTCTTGAATTTGTGAGTACTGTGCATGATCTCTGTGCTGTCCTTGGTATGGATTTCTTCAGTACTGTAACCGAGGTTCATCCTAGCCTAAATGATTCTACCGGTGTTCAATCTAAAAGCATAAGCAATGACACACTAGCTAGGCTGGCTAAGACAGTGTTGACGCTGAAAGAAGATAAGAAGCAAAGGCTGCAGAAGCTCCAAGAATTAGCTTCTCAATTAATTGATCTGTGGAATCTAATGGATACCCATCCAGAGGAAAGAAAACTATTTGACCATGTTACCTGTAATATGTCGGCTTCTGTTGATGAAGTCACTGTTCCTGGGGCCCTTGCTTTGGATTTGATTGAGCAGGCCGAAGTAGAAGTTGAGAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAAATTGCTTTCAAGAAGCAAGGAGAACTTGAAGAGATATTTGCCCGTGCTCATATAGAAATAGATCCAGAAGCTGCCCGGGAGAAGATTTTGGCGATGATTGATTCTGGAAACATTGAACCAACCGAATTATTGGCTGACATGGACAAACAGATAGCAAAAGCAAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTACAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGTATACTTGTCAACAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGCGCATGGGAAGAAGATCATGGCATGTCATTTGCATATGATGGTGTTCCTCTTCTTGCGATGTTAGATGAATATGCCATGCTCAGGCATGAACGGGAAGAGGAAAAGCGAAGGATGAGGGACCAGAAGAAGTACCATGAGCAGCAAAACACAGAACAGGAAGCCATCTTTGGTTCAAGACCTAGCCCTGCTAGGCCAGCTAGTGCCAAGAAGGTAGGCCCTCGCGCTAACGGCGGAGCCAACGGTACTCCTAACCGAAGGCTATCACTCAATACTCATCAGAATGGAAGCAGGTCCACATCCAAAGACACAAAAAGGGATAACACTAGACTAAGCGCTCCCGCGAATTATGTGGCCATGTCGAAAGAAGATGCTGCTTCCCATGTTTCTGGCACTGAACCCATCCCAGCATCACCCTAA 1749 0.4483 MAVTEAQNPLLGEQTCGSLLKKLQEIWDEVGESDEQRDKMLLQLEQECLDVYRRKVEQAAKSRAQLLQALSDAKLELSSLLSALGEKSSAGIPEDTSGTIKEQLAAIAPILEQLWQQKEERIKEFSDVQSQIQKICGEIAGSLNLSDDPPAVDESDLSLKKLDEYQSEFQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKQRLQKLQELASQLIDLWNLMDTHPEERKLFDHVTCNMSASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQGELEEIFARAHIEIDPEAAREKILAMIDSGNIEPTELLADMDKQIAKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGMSFAYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKYHEQQNTEQEAIFGSRPSPARPASAKKVGPRANGGANGTPNRRLSLNTHQNGSRSTSKDTKRDNTRLSAPANYVAMSKEDAASHVSGTEPIPASP* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0242 582 Coils Coil 461 481 - -
Dod08g0242 582 Coils Coil 155 182 - -
Dod08g0242 582 MobiDBLite consensus disorder prediction 476 493 - -
Dod08g0242 582 Gene3D - 368 502 - -
Dod08g0242 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 508 - -
Dod08g0242 582 MobiDBLite consensus disorder prediction 476 582 - -
Dod08g0242 582 Coils Coil 239 259 - -
Dod08g0242 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 4 582 IPR007145 GO:0000226|GO:0008017
Dod08g0242 582 MobiDBLite consensus disorder prediction 525 541 - -
Dod08g0242 582 Coils Coil 298 318 - -
Dod08g0242 582 Coils Coil 49 76 - -
Dod08g0242 582 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 4 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0242 Dod-Chr8 2676899 2681306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0242 13 557 EF-hand Containing Proteins AT5G62250 42.011 2.31e-124 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0242 K16732 - gmx:100806071 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0242 08 2676899 2681306 Dod08g0242 08 2676899 2681306 ECH
Dod05g0769 05 12072226 12077165 Dod08g0242 08 2676899 2681306 PCT