Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0231 ATGGTGATGCCTCTTCGTGTGACAAACCCAAACGAGCTTCTTCTCTCATCTTCAATGAGTATATACCACAATGCATTGTGTTCGTCACCCTCTGTTTCTCTTCACCCCAGAACAACACCGACAACAACAGCAATTGCCCCACAACGCCTCACACGTCGTCGTTTCGAGTCGGTGAGATGCTCCTACGCTTTTGTAGATAATGCAAAGATTAAGGTTGTCGGCATCGGTGGCGGCGGCAACAATGCCGTCAATCGCATGATCGGTAGTGGTTTACACGGTGTAGATTTCTATGCAATAAACACTGATGCTCAAGCGCTATTGCATTCTGCTGCTGAGAATCCTATTCAGATTGGAGAGCTTCTGACTCGTGGATTAGGTACTGGAGGGAATCCACTTTTGGGGGAGCAAGCTGCTGAGGAATCAAAAGAAGCTATTGCCAATGCTCTTAAGGGATCGGATTTAGTGTTCATAACAGCTGGGATGGGTGGGGGAACAGGCTCTGGTGCTGCCCCTGTTGTGGCCCAAATATCCAAAGAGGCTGGTTACTTGACTGTAGGTGTCGTCACCTATCCATTTAGTTTTGAAGGACGCAAAAGATCCTTGCAGGCACTTGAAGCCATTGAAAGGCTGCAGAAAAATGTTGATACGCTTATAGTGATTCCAAACGACCGTTTGCTTGACATAGCTGATGAGCAGACAGCTCTTCAGGATGCTTTCCTTCTTGCAGATGATGTTTTACGTCAAGGAGTGCAGGGAATATCAGACATTATAACAATACCTGGACTTGTAAACGTGGATTTTGCTGATGTTAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGCGTCTCCTCTGGTAAAAACCGAGCAGAGGAAGCAGCGGAACAGGCTACTTTGGCTCCTTTAATTGGCTCATCTATTCAGGCAGCTACTGGAGTAGTGTATAATATCACCGGTGGAAAGGACATAACCCTGCAGGAAGTGAATAGGGTGTCTCAGGTGGTGACAAGTTTGGCAGATCCTTCTGCTAATATTATATTTGGGGCTGTTGTTGATGACCGCTACACTGGGGAAATTCATGTGACTATCATTGCAACTGGCTTCTCGCAGTCTTTTCAGAAGAAGCTACTAACAGATCCAAGGGCTGCAAAGTTACTTGACAAAGTGGTTGAGGGCCAAGAAAGCAAGGCAATGCCCCTCAAGTCCTCAAATTTACCGTCAACGGTTGAATCTAGAGCATCCCCACGAAAGCTCTTTTTTTAG 1272 0.4631 MVMPLRVTNPNELLLSSSMSIYHNALCSSPSVSLHPRTTPTTTAIAPQRLTRRRFESVRCSYAFVDNAKIKVVGIGGGGNNAVNRMIGSGLHGVDFYAINTDAQALLHSAAENPIQIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIERLQKNVDTLIVIPNDRLLDIADEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQAATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVVEGQESKAMPLKSSNLPSTVESRASPRKLFF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0231 423 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 162 168 IPR017975 GO:0005525|GO:0005874|GO:0007017
Dod08g0231 423 Gene3D - 277 384 IPR037103 -
Dod08g0231 423 Pfam Tubulin/FtsZ family, GTPase domain 69 229 IPR003008 GO:0005525
Dod08g0231 423 TIGRFAM ftsZ: cell division protein FtsZ 66 379 IPR000158 GO:0003924|GO:0005525
Dod08g0231 423 SUPERFAMILY Tubulin nucleotide-binding domain-like 68 264 IPR036525 -
Dod08g0231 423 SMART Tubulin_C_4 263 380 IPR018316 -
Dod08g0231 423 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 423 - -
Dod08g0231 423 CDD FtsZ_type1 82 370 IPR000158 GO:0003924|GO:0005525
Dod08g0231 423 ProSitePatterns FtsZ protein signature 2. 153 174 IPR020805 GO:0005525
Dod08g0231 423 Pfam FtsZ family, C-terminal domain 278 371 IPR024757 -
Dod08g0231 423 PRINTS Cell division protein FtsZ signature 268 289 IPR003008 GO:0005525
Dod08g0231 423 PRINTS Cell division protein FtsZ signature 182 203 IPR003008 GO:0005525
Dod08g0231 423 PRINTS Cell division protein FtsZ signature 245 267 IPR003008 GO:0005525
Dod08g0231 423 PRINTS Cell division protein FtsZ signature 154 174 IPR003008 GO:0005525
Dod08g0231 423 SMART Tubulin_4 69 261 IPR003008 GO:0005525
Dod08g0231 423 SUPERFAMILY Tubulin C-terminal domain-like 263 379 IPR008280 -
Dod08g0231 423 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 423 IPR045061 GO:0003924|GO:0005525
Dod08g0231 423 ProSitePatterns FtsZ protein signature 1. 100 134 IPR020805 GO:0005525
Dod08g0231 423 Gene3D Tubulin/FtsZ, GTPase domain 63 276 IPR036525 -
Dod08g0231 423 Hamap Cell division protein FtsZ [ftsZ]. 65 417 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0231 Dod-Chr8 2620342 2623210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0231 K03531 - gmx:100808722 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0231 08 2620342 2623210 Dod08g0231 08 2620342 2623210 ECH