Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0229 ATGGTAAAGAATATGAAGGAGGCATCTTCAGATGATGAGGCAGAGGCCCAGTTCGTCTGTGTGTCCAATTACCACCTTGAAGATGAAGACCGCGAGCCTGTTTCTTTTGCTGTATTGCCAATTCAATGGAGTGAAGCTGAGAAGAATTCTGATGCCACCAAAGGACAGGTGTTCCTGCACGGCTTCGCAGATAATGGGCTGAAGATGGTTATGATGCAGGTCACAGCATGGAGATTTGATCTTTCCCATGCAAAACCCGAGATATCATTGCTATCATCAAAGGATAAGAGGTGGATAAAGCTACAGAAGCCAAGGAACAGCTATCAGGATACTATCAGGACAATTTTGATCACTGTTCACTTCCTGCATCACGTGAAGAAATATCCTGAAATATCTGCCAAATCTATCTGGGTTAGCTTGTTTAAGGATAAGGAGTTGAGCTCTTATAAGTTTAAGCCTTCACAAAAGGATTTGTTGGACCATATGTCATTAATTGGTGAAGCTTCCAAAAGAGTTGCTGTCTTATCTAAGTCCAAGTTTCTGCTCACGGTTTTGAAGGAGAAGCTGGGGAATAAGAAACTTGCTGATGAGGAAGTTAAAGATTTGATACGGTCTGCATTTATAGTTGATGATATTGACAATGGTATGATGAATGAAGCTAAAAAAGAGTCCAAAGCAGAGGATGATTCGTCTAAATCTGTTTGTGCGATTTGTGACGACGGTGGTGATCTTATTAGTTGTGAAGGACCGTGCATGAGGTCATTTCATGTGACAGTGGAGGATGGGAGTGATTCAATGTGTGATTCCCTTGGTTTCACCCAAAAAGAAGCTGAGGGGATCGAGAACTTTTATTGTAAGAATTGTAAGTATAATCAGCACCAGTGCTTTGCATGTGGCAAGCTGGGATCTTCTGGTAAAGTTGAAGGTGCTGAGGTCATTAAATGTGCTTCTGCTACCTGTGACCTCTTTTATCATCCACACTGTGTTGCAAAGTTACTTCCCAAGGTAGTGAAGCATGTTGCAAAGGAATATGAGAGAAATGTTGCTGATGCAAAATCTTTTACTTGTCCTGTTCATTATTGTTGTGTCTGTAAAGAACTAGAAAACATGATGGAACCTGAATTGCAATTTGCTGTTTGTAGACGTTGTCCAAAATCATATCATCGCAAATGTTTGCCGAGAGAGATTGTTTTCTCCGACACAGATGAAGATATTATGCCAAGGGCTTGGGATGGTCTTTTACCAAACAATCGCATTCTTATATATTGCTTGAATCATGAGATAAATGAAGAAATTGGGACCCCTGTAAGAAATCATATAAAATTCCCCAATGTCAAAGCTACTGTTCCAGGAATCAAGGATATGAAAGAAAAGATGAAGCCTGCCATGAAACAGAGAATTATATCAAACAAGAAGAATGTTGACCTAGATAATTCACCTGACAAAGGCTCTGCTAAACGATCTAAGGTGACTGGAAAGCTCTCTCCTGGGAAAGTTGGTAGTGAGGAGAATTCTGGAAAGATTGTTTCTGGTTCAAATACCTCAAACAAGAACAATGTTGTCCTGGATAATTCATCTCAGAAAAGCTCTGCTAAAGGATCTGAGGTGACTGGAAAACTGTCTCCTGGGAAAGTTGGTAGTGAGAAGAATTCTGAGAAGATTGTTTCTGGTTCAAATATCTCAAACAAGAACAATGTTGTACTGGATAATTCATCTGGCAAAAGCTCTGCTAAAGGATCTAAGGTGACTGGAAAACCGTCTCCTGGGAAAGTTGGTAGTGGGAAGCATTCTGGAAAGATTGTTTCTGGTTCATATACCTCAAACAAGAACAATGTTGACCTGGATAATGCATCTGGCAAATGCTCTGCTAAAGGATCTAAGGTGACTGGAAAACTGTCTCCTCAGAAAGTTGGCAGCGAGAAGAATTCTGAAAAGATGGTTTCTGGTTCAAATATCTCAACAAAGCATAAAGCAAATGGAACATCTAGAGCTTCTTTGACTGAAAACAAGATGTCAATTTCAAAGAAATTTGAAGTGCCTGACTCTGAGGAAAACAAGCCATTGCGTGTTCTCATGAGTAAGGGTTCTATGCAAACTAAGCGTAGAAAGGTCAGTAATGCAGTTTGTAAGACCCTATCTGTTAAACCCATTAGACAGATGCTGCCTGGATCAGTTGATGTAAATGATAAAAAAATTGACCAACAGAATGAAAGGCCACCCCTGCTCTCCTATCCGAGCCACTCTGACTCCACTACTAAACACAAGATCATTTTCCGGGGGCAAGGAGATGTGTCAACCCAGCATCAAGTCTCAAAGATGCAGAGCTCTAATATTGAAACATTGCCTGCTGATCGTACGATGAATGGTAATAGTGTTGATAACATCAAGCTGAGTCATGATCTCTTGAAGTCATGTGATGATCAAGAAGATCAAGCATCTATAAATGGGGGTCAGAAAAGCTCGCCTAGTGGTAATGTTGACCAAGAGAGCCAAGAGGGACAAGAATCTAAGACATCCGAGTCTGGCAGGACATCATTGAAGAGGAAATGTACTGGGAAAAATGATAGAAGAGGACAGGCTGCAGTCTCATCAGCCAAAAGGCAGGCTGTAAATGAAAATCTTGAGGGGGTGCCTGGCCATTGTCAACACAATGCCATTGATGGGAGATCCTCACTTGAAGGTTATCAAACCAAACCTACTGTGGCCTCTCCAGATGGGCCAAGTGTGGAGCATCATAGTAGGGAGGAGATGGACCTCACAGAATCAGATACAAGTCAACCGGATGACCTTGATGGGGTTCATGATCATGATTCTCGACTGAGTGATTTTCTATCTGGTCGTGATCGTTCCTTTGTCCACATGGTATATGGTCGTGCCCAACCTAGTTCAGTATCTGAGTCATCATATTATAAGATGAATGCACCAGCTATAGCAACTCACCTAGATGATACGATGGGTTCTTTGGGGTCTGAACCTCCTGCAGCTAGTAGAAATGGTAACTCTGAAAGTAGGATGGCCCAATGTGGATATGTTGGTAGTTTTATGGGCTTTGCACCTGGTCCTCACCGCCTTGCATATTCACCCCAGAACTCGGCAGGTTGGATCAATGAGTAG 3114 0.4181 MVKNMKEASSDDEAEAQFVCVSNYHLEDEDREPVSFAVLPIQWSEAEKNSDATKGQVFLHGFADNGLKMVMMQVTAWRFDLSHAKPEISLLSSKDKRWIKLQKPRNSYQDTIRTILITVHFLHHVKKYPEISAKSIWVSLFKDKELSSYKFKPSQKDLLDHMSLIGEASKRVAVLSKSKFLLTVLKEKLGNKKLADEEVKDLIRSAFIVDDIDNGMMNEAKKESKAEDDSSKSVCAICDDGGDLISCEGPCMRSFHVTVEDGSDSMCDSLGFTQKEAEGIENFYCKNCKYNQHQCFACGKLGSSGKVEGAEVIKCASATCDLFYHPHCVAKLLPKVVKHVAKEYERNVADAKSFTCPVHYCCVCKELENMMEPELQFAVCRRCPKSYHRKCLPREIVFSDTDEDIMPRAWDGLLPNNRILIYCLNHEINEEIGTPVRNHIKFPNVKATVPGIKDMKEKMKPAMKQRIISNKKNVDLDNSPDKGSAKRSKVTGKLSPGKVGSEENSGKIVSGSNTSNKNNVVLDNSSQKSSAKGSEVTGKLSPGKVGSEKNSEKIVSGSNISNKNNVVLDNSSGKSSAKGSKVTGKPSPGKVGSGKHSGKIVSGSYTSNKNNVDLDNASGKCSAKGSKVTGKLSPQKVGSEKNSEKMVSGSNISTKHKANGTSRASLTENKMSISKKFEVPDSEENKPLRVLMSKGSMQTKRRKVSNAVCKTLSVKPIRQMLPGSVDVNDKKIDQQNERPPLLSYPSHSDSTTKHKIIFRGQGDVSTQHQVSKMQSSNIETLPADRTMNGNSVDNIKLSHDLLKSCDDQEDQASINGGQKSSPSGNVDQESQEGQESKTSESGRTSLKRKCTGKNDRRGQAAVSSAKRQAVNENLEGVPGHCQHNAIDGRSSLEGYQTKPTVASPDGPSVEHHSREEMDLTESDTSQPDDLDGVHDHDSRLSDFLSGRDRSFVHMVYGRAQPSSVSESSYYKMNAPAIATHLDDTMGSLGSEPPAASRNGNSESRMAQCGYVGSFMGFAPGPHRLAYSPQNSAGWINE* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0229 1037 MobiDBLite consensus disorder prediction 551 582 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 889 903 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 459 687 - -
Dod08g0229 1037 CDD PHD2_NSD 294 359 - -
Dod08g0229 1037 PANTHER ENHANCED DOWNY MILDEW PROTEIN 720 1031 - -
Dod08g0229 1037 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 720 1031 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 908 939 - -
Dod08g0229 1037 SMART PHD_3 294 360 IPR001965 -
Dod08g0229 1037 SMART PHD_3 234 289 IPR001965 -
Dod08g0229 1037 SMART PHD_3 361 427 IPR001965 -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 808 832 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 833 855 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 599 617 - -
Dod08g0229 1037 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 8 518 - -
Dod08g0229 1037 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 608 718 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 762 792 - -
Dod08g0229 1037 Pfam Cytosine specific DNA methyltransferase replication foci domain 21 132 IPR022702 -
Dod08g0229 1037 PANTHER ENHANCED DOWNY MILDEW PROTEIN 8 518 - -
Dod08g0229 1037 PANTHER ENHANCED DOWNY MILDEW PROTEIN 608 718 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 505 536 - -
Dod08g0229 1037 CDD PHD_SF 360 405 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 807 939 - -
Dod08g0229 1037 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 292 411 IPR013083 -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 728 750 - -
Dod08g0229 1037 MobiDBLite consensus disorder prediction 628 672 - -
Dod08g0229 1037 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 291 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0229 Dod-Chr8 2606357 2612502 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0229 - - adu:107496360 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0229 08 2606357 2612502 Dod08g0229 08 2606357 2612502 ECH