Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0223 ATGTGGAAATCACGCGCTTCGCCATTTCTCGTGCTGCTTCTTCTTGTTCAGTTGCTGCTTGTAGCTGTGGTCTCAGCACAGAGATCCAACACATCCGTTTGGAACACACTCAGCGGAAATCCTCCATTGGTCATAGCACGTGGTGGGTTTTCAGGGATATTTCCGGATTCCACTGATCCTGCCTATAAGTTCGCGTTATCAACAAGCGTAGCCGATGTCCTTCTGTGGTGTGATGTGCAATTAACAAAAGATGGATTTGGACTTTGCCTTGCAGACATCAAGCTTGATAATGATACTGACATTGCAAAATTTTTCCCGAATCAAAGCACGACTTACTTAGTGAATGGTGTGCCCACCAGCGGCTATTTTTCTGTGGATTACACTGCGAATGACTTATTCAATGTCTCCGTGGTTCAGGGAATATATTCTCGAACTGATCTGTATGATGGAAGTCAGTTGCAAATTCTTACTGTTGATGATGTAGTTAAATTAGCAGCCCCAGCACCAGGCTTGTGGCTAAATATGCAGCATGATGCATTCTACACACAACACAATTTGAGTGCGAGAAGCTTTGTACTTTCAGCTTCTAGAAGAGTGGTTATCAGTTATATCTCATCACCGGAGGTTGGTTTTCTGAGAAGTATAACAACGCGCTTCAACCCAAAAACAACGAAATTGGTGTTCAGGTTCCTGGGACAGGACGCTAGAGAACCATCAACCAATCAGACTTATGGTTCACTCTTAAAAAATCTTACATTTATTAAGACGTTTGCTTCTGGAATTCTTGTTCCCAAGGGATATATATGGCCTATAGACGCAGGCCGTTATCTACTACCTCATACCTCTTTGGTCTCAGATGCTCATAAAGTGGGGCTGGAGGTCTTTGCTTCTGATTTTGCAAATGATCTTCTTTTGAGCTATAATTACAGTTATGATCCTCTCGCAGAGTACCTCCAATTCATCGACAATGGTGACTTCTCTGTTGATGGTGTGTTATCTGACTTCCCTATAACTCCATCTGAAGCTGTAGATTGCTTTGCTCACCTTGGAACCAATGCCACAAAAAAAGTTAATACTTTGATTATCTCAAAATATGGAGCAAGTGGAGATTATCCTGCTTGTACTGACTTAGCATATCAAAAGGCCATATCAGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCAAAGGATGGAATACCGCTTTGCCTAAGCTCCATTAATCTTATAGAGAGTACAAATGCTGCTCAATCAAGCTTCAGCAATCTTGCCACAACTATCCCTGAGATTCAATCTGGCAATGGCATATTTACATTCAGCTTGAGATGGGATGATATAAAAAGCCTGACACCCTCAATAATGAGCCCTTTTTCAGATTACCCTGGACTCACAAGGAATCCAAGATACAGGAATGCTGGGACACTCCTAACATTGTCAGATTTCTTGTCCTTGACCAAAAACCAGACTTCTCTATCAGGTGTCATGATCATTATTGAGAATGCGGCCTATCTTGCAGAGAAGCAAGGATTAGGTGTGACTGATGCAGTCAGTGATGCTTTGAGCAAAGCAGGTTATGATAAACCTGGTGCCCAAAAAGTTATGATTCAATCCAGTAATAGCTCTGTACTACTGAAGTTCAAGGAGAATACCACTTATGAGCTTGTCTACAGGGTTGATGAGACTATTGGCGATGCTGTTAATTCTGCTGTTCAGGATATAAAAAGCTTTGCCAGTTCCGTAGTTATCAACAAGAATTCTGTATTTCCTCGTGATGCCGCCTTCCTGACTAGCACTACAAAAACTGTGTCAAAGCTAAAATCTTCTAACCTCTCAGTTTTTGTGGAAACATTCAGCAATGAGTTTACGTCTCAGGCATGGGATTTCTTCTCAGATGCAACTGTGGAGATCAACTCATTTATTACGGGAGTACAAATTGATGGTGTCATCACAGATTACCCAAAAACTGCCAATAGATACAGAAGGAATCGGTGCTTAAATTTGGGTAACAACACACCTCCTTACATGCTTGCTGCTCAAGCAGGTGAGCTTTTTGGACTTATTCCTCCGGGCGGCGCGCCTCCGGCTCCTGCTCCATTCCCACCCTTGACAGACTCTGAAGTGAAAGAGCCACCTTTGCCTGCTGTTTCCAAAATAGCCCCGGCTGCTGGCCCTACTCCTGGAACCAGGCCAGGAGGGCAAGGAAATGCACAGCCAAAGGTCACAATCTGCATGTTCTTGTCCAGTTTGGCTGTGCTTGGAACTTCTCTTCTTCTACTTTGA 2283 0.4314 MWKSRASPFLVLLLLVQLLLVAVVSAQRSNTSVWNTLSGNPPLVIARGGFSGIFPDSTDPAYKFALSTSVADVLLWCDVQLTKDGFGLCLADIKLDNDTDIAKFFPNQSTTYLVNGVPTSGYFSVDYTANDLFNVSVVQGIYSRTDLYDGSQLQILTVDDVVKLAAPAPGLWLNMQHDAFYTQHNLSARSFVLSASRRVVISYISSPEVGFLRSITTRFNPKTTKLVFRFLGQDAREPSTNQTYGSLLKNLTFIKTFASGILVPKGYIWPIDAGRYLLPHTSLVSDAHKVGLEVFASDFANDLLLSYNYSYDPLAEYLQFIDNGDFSVDGVLSDFPITPSEAVDCFAHLGTNATKKVNTLIISKYGASGDYPACTDLAYQKAISDGVDVLDCPVQMSKDGIPLCLSSINLIESTNAAQSSFSNLATTIPEIQSGNGIFTFSLRWDDIKSLTPSIMSPFSDYPGLTRNPRYRNAGTLLTLSDFLSLTKNQTSLSGVMIIIENAAYLAEKQGLGVTDAVSDALSKAGYDKPGAQKVMIQSSNSSVLLKFKENTTYELVYRVDETIGDAVNSAVQDIKSFASSVVINKNSVFPRDAAFLTSTTKTVSKLKSSNLSVFVETFSNEFTSQAWDFFSDATVEINSFITGVQIDGVITDYPKTANRYRRNRCLNLGNNTPPYMLAAQAGELFGLIPPGGAPPAPAPFPPLTDSEVKEPPLPAVSKIAPAAGPTPGTRPGGQGNAQPKVTICMFLSSLAVLGTSLLLL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0223 760 Pfam Glycerophosphoryl diester phosphodiesterase family 366 656 IPR030395 GO:0006629|GO:0008081
Dod08g0223 760 ProSiteProfiles GP-PDE domain profile. 42 343 IPR030395 GO:0006629|GO:0008081
Dod08g0223 760 CDD GDPD_SHV3_repeat_1 42 342 - -
Dod08g0223 760 SUPERFAMILY PLC-like phosphodiesterases 40 342 IPR017946 GO:0006629|GO:0008081
Dod08g0223 760 CDD GDPD_SHV3_repeat_2 360 660 - -
Dod08g0223 760 ProSiteProfiles GP-PDE domain profile. 359 661 IPR030395 GO:0006629|GO:0008081
Dod08g0223 760 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 13 758 - -
Dod08g0223 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 342 IPR017946 GO:0006629|GO:0008081
Dod08g0223 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 358 660 IPR017946 GO:0006629|GO:0008081
Dod08g0223 760 SUPERFAMILY PLC-like phosphodiesterases 359 661 IPR017946 GO:0006629|GO:0008081
Dod08g0223 760 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 13 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0223 Dod-Chr8 2565478 2570963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0223 5 760 Receptor kinase-like Gene Family AT4G26690 55.979 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0223 - - gmx:100811399 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0741 05 11455907 11465174 Dod08g0223 08 2565478 2570963 PCT