Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0186 ATGCCCTCAAAGTCTAATTCTACTACTGTTGAGGCTTCAAGGCCACTTTCTCATAACACAAACAGATCCCAAACCAATGATCTTTCAAGTGGTTACTCCAAAATCTTCAGATCCAGTTTCACTGATCCTGTTCCCTCCTTGTCCATTTGCAAACGCCAACAGGTCAACGCCTTGCACACTCCTAGTACTACTTTTGTCGAGGAAGTTGTTGAACAGGTTGAAGAAGATGAGGTGGATCTGTGGCTGAAGATGGTGGAAGAAGCTAAAGTTGATGTCACTGAGGAACCCATTTTGTCTAGTTACTATCACACCTCAATTTTGTCTCATGATTCCTTGGAAAGTGCTCTGGCTAATCACCTTGCTAAGAGATTGAGCAGTGCAAGCCTTCCAAGTGGTACCCTTTTTGATCTATTTGTAGGGATTCTGAAATCTGATCAAAACATTATGGGTTGTGTGAAGGATGATTTGAGAGCAGTGAAGGAAAGGGACCCTGCTTGCATTAGCCATGTGCACTGTTTCTTGAACTTCAAAGGCTTTTTGGCATGTCAAGCTCATAGGGTTGCTCATAAATTGTGGTCGCAAGGAAGGAAGGTTCTGGCAGTGATGATTCAGAACAGGGTTTCTGAGGTCCTTGCTGTGGATATACATCCTGCTGCTGAGATTGGAAGTGGGATTTTGCTGGATCATGCAACTGGGATAGTGGTTGGTGAGACTGCTGTGATTGGGAACAATGTGTCAATCTTGCATGGTGTGACATTGGGAGGGACTGGTAAGGCTTGTGGGGACAGGCACCCAAAGATTGGTGATGGGGTGCTGATTGGTGCAGGAACTTGTATACTGGGGAATATTAAGGTTGGTGAGGGGGCCAAGATTGGTGCTGGTTCAGTGGTGATTAAGGAAGTTCCCCCAAGGACTACTGTTGTTGGGAACCCAGCGAAGTTGGTAGGAGGGAAGAACAACCCCATAAAATTGGATAAGATTCCTAGCTTCACCATGGATCATACCTCAAATATTTCTGAATTTTATGATTATTGTGTTTAG 1041 0.4457 MPSKSNSTTVEASRPLSHNTNRSQTNDLSSGYSKIFRSSFTDPVPSLSICKRQQVNALHTPSTTFVEEVVEQVEEDEVDLWLKMVEEAKVDVTEEPILSSYYHTSILSHDSLESALANHLAKRLSSASLPSGTLFDLFVGILKSDQNIMGCVKDDLRAVKERDPACISHVHCFLNFKGFLACQAHRVAHKLWSQGRKVLAVMIQNRVSEVLAVDIHPAAEIGSGILLDHATGIVVGETAVIGNNVSILHGVTLGGTGKACGDRHPKIGDGVLIGAGTCILGNIKVGEGAKIGAGSVVIKEVPPRTTVVGNPAKLVGGKNNPIKLDKIPSFTMDHTSNISEFYDYCV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0186 346 Gene3D serine acetyltransferase, domain 1 62 213 IPR042122 -
Dod08g0186 346 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 8 345 - -
Dod08g0186 346 MobiDBLite consensus disorder prediction 1 30 - -
Dod08g0186 346 PANTHER SERINE ACETYLTRANSFERASE 8 345 - -
Dod08g0186 346 Pfam Serine acetyltransferase, N-terminal 80 184 IPR010493 GO:0005737|GO:0006535|GO:0009001
Dod08g0186 346 SMART SATase_N_2_a 80 184 IPR010493 GO:0005737|GO:0006535|GO:0009001
Dod08g0186 346 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 273 301 IPR018357 GO:0016740
Dod08g0186 346 TIGRFAM cysE: serine O-acetyltransferase 152 313 IPR005881 GO:0005737|GO:0006535|GO:0009001
Dod08g0186 346 Pfam Bacterial transferase hexapeptide (six repeats) 264 298 IPR001451 -
Dod08g0186 346 SUPERFAMILY Trimeric LpxA-like enzymes 77 316 IPR011004 -
Dod08g0186 346 Gene3D Hexapeptide repeat proteins 214 334 - -
Dod08g0186 346 CDD LbH_SAT 213 311 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0186 Dod-Chr8 1915845 1917486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0186 80 344 Miscellaneous Gene Families AT2G17640 53.585 5.60e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0186 K00640 - gmx:100820316 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0186 08 1915845 1917486 Dod08g0186 08 1915845 1917486 ECH
Dod05g0691 05 10389006 10391252 Dod08g0186 08 1915845 1917486 PCT