Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0160 ATGGCACGCGAGAAGCGACCCAACTGCCCTCACCACTTCAAAGCAGGAGCTATGAATGCACTGATAAGAGTGTCGTCAGAGGTAAGCAACGCCCCACTCATCCTCAACTTGGACTGTGACATGTACCCAAGTAACACAGATATAATTCAAGAAACACTATGTTTCTTCATGGATGAAGCGAAAGGCCACGAGATAGCTTACGTGCAATTTCCACAGAACTATAATAATCTCACCAAGAATGACCATTATGCAAATGATTATCTTGTAACCAACATGTTTGAGCTAGCTGGCATAGGTGGACATGGAGCAACCTTGTATTGTGGAACTGGGTGTTTCCATAGAAGAGAAAGTCTTTCAGGAACTCACTTGAAAGATTATAAAGCCAAAAGGCACATCAAGCCCAAAAGAGAATATCATAGAACAATTGATGAATTGAATGAAGCATCCAAAGCACTTGCCACTTGTACCTATGAGCAGGGTACTCAATGGGGGAAGGAGATGGGGTTAGTGTATGGTATTCCTGTGGAAGACATTGCCACTGGCCTTGTAATCACGTGCAGGGGTTGGAAATCGATTTATTACAATCCGGAAAGGAAGGCTTTCTTGGGGGTAGCTCCAACATCCTTAGATGTAGCTCTTGTTCAGCAAAAGAGGTGGTCCGAAGGCATGTTTCAGGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCATGGGAAGATGAACTTGGGTGTGCAAATGGGATATTGTGTCTACCTCTTATGGGCTCCTTTGTCCCTGCCTACTTTGTGTTATGTCATTATTCCCTCTATTTGCTTACTTCGTGGCATACCATTGTTCCCACAGCTTACAAGCCTATGGTCCCTTCCCTTTGCTTATGCATTTCTTGCCACAAATGGCTATAGCATATGTGAGGCTTGGAGTTGTGGGTCCACAACAAAGGCTTGGTGGAACTTGCAAAGAATGAAGCTCATCCGAAGAACCACTTCCTACTTCTTTGGCTTCATTGATACCATAACCAAGCAACTGGGGCTATCAGAGACAAAATTTGCCATCACAGATAAAGTGGTCACTGAGGATGTCCAAAAGAGGTATGAGCAAGAGGTCATTGATTTTGGAGGCTCTTCTTCAGTCATGTTAACCATAATAGTCACTGTGGCAATGTTGAACCTTTTTGGCCTTGTTGGGGGAATTAAGAGGATTCTAATGGATTTAGAATTCAACAGCTCAGGCCAATTGATGTTGCAGGTTATGCTTAGTGCATTGATAGTAATGGTGAATTTACCAGTGTATGAAGCTCTTGTAATCCGCAGTGACAAAGGGTGCATATCATCTGTGGTCACACTTAAGTCCATTGTTTTGGCTTCATTGGGATGTTGCCTAGCTACATTCATCTGCTAG 1401 0.4333 MAREKRPNCPHHFKAGAMNALIRVSSEVSNAPLILNLDCDMYPSNTDIIQETLCFFMDEAKGHEIAYVQFPQNYNNLTKNDHYANDYLVTNMFELAGIGGHGATLYCGTGCFHRRESLSGTHLKDYKAKRHIKPKREYHRTIDELNEASKALATCTYEQGTQWGKEMGLVYGIPVEDIATGLVITCRGWKSIYYNPERKAFLGVAPTSLDVALVQQKRWSEGMFQVFFSKYCPFIYGHGKMNLGVQMGYCVYLLWAPLSLPTLCYVIIPSICLLRGIPLFPQLTSLWSLPFAYAFLATNGYSICEAWSCGSTTKAWWNLQRMKLIRRTTSYFFGFIDTITKQLGLSETKFAITDKVVTEDVQKRYEQEVIDFGGSSSVMLTIIVTVAMLNLFGLVGGIKRILMDLEFNSSGQLMLQVMLSALIVMVNLPVYEALVIRSDKGCISSVVTLKSIVLASLGCCLATFIC* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0160 466 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 1 461 - -
Dod08g0160 466 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 461 - -
Dod08g0160 466 SUPERFAMILY Nucleotide-diphospho-sugar transferases 10 231 IPR029044 -
Dod08g0160 466 Pfam Cellulose synthase 145 457 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod08g0160 466 Pfam Cellulose synthase 2 125 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod08g0160 466 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 126 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0160 Dod-Chr8 1742097 1745581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0160 1 462 Glycosyltransferase AT1G55850 49.676 1.76e-154 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0160 - - lja:Lj2g3v3315650.2 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0160 08 1742097 1745581 Dod08g0160 08 1742097 1745581 ECH
Dod05g0669 05 9957888 9964645 Dod08g0160 08 1742097 1745581 PCT