Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0136 ATGTCTAGAATCTTAAGGAATCTGTCACTCACTCCCAAAATCTTCTCCCTCGCCTTGCTTCTATCAATAAACTCTCTTTTCTTTTCATGCTGTTACTCCCTCAGTGAACAAGGCCAAGCCCTTGTAGCATGGAAAAACAGTTTAAATGGAACTGCAGATGCGTTAGCATCTTGGAACCCTTTAAACCAAAGTCCATGCAACTGGTTTGGAGTGCACTGCAACTTGCAAGGTGATGTGGTGGAGATAAACCTGAAATCAGTGAACTTGCAAGGTTCACTACCTTCAAATTTTCAATCACTCAAGTCCTTAAAGGTTCTTGTCCTCTCATCAACCAACATAACAGGCATGATTCCAAGAGAAATTGGAGAGTGTCAAGAGCTTGTTTCTATTGATCTTAGTGACAATTCTCTCTTTGGTGAAATACCAGAAGAACTTTGTATGCTAAGCAAACTGCAGACTCTTGCTCTCCACACAAACTTCCTTGAAGGCAGTATTCCATCCAACATAGGAAACTTATCAAGCCTTGTGAACTTGACACTCTATGACAACAAACTGAGTGGTGAAGTTCCAAACAGTATTGGCTCCTTGACCAAGCTCCAAGTGTTCAGGGCTGGAGGGAACACTGACCTCAAGGGTGAGCTACCATGGGAGATTGGCAACTGCACCAACTTGGTCGTGTTAGGCCTTGCAGTAACCAGCATTTCTGGGAGCCTTCCTTCATCAATAGGGATGCTGAAAAGACTTCAGACACTAGCCATTTACACAACTCTATTGTCAGGCTCAATCCCAGAAGAGATTGGAAACTGCAGTGAGTTGGAGAACCTGTACTTGTACCAGAACTCTATCTCTGGTTCAATACCAACTCAAATTGGAAAGCTTAGCAAGCTTCAGAATCTGCTTTTATGGCAGAACAAAATAGTTGGAACAATCCCAGAAGGCCTTGGAAGCTGCAAAGAGCTCATAGTCATAGACTTATCAGAAAATCTTCTCACGGGTAGCATACCAGTGGGCTTTGGAAAGCTTTCAAATCTCCAAGGGCTCCAACTGAGTGTTAACCAGCTCTCAGGTACTATACCTCCTGAGATTTCAAACTGCACTTCTCTGACTCAATTGGAAGTTGACAACAATGCTATTTCTGGAGAGATTCCGGCTGCTGTTGGCAACTTGAGAAGCTTGACCCTGTTCTTTGCATGGCAGAACAAGCTAACTGGGAAAATCCCAGATAGTCTTTCAAATTGCCAAGATCTTCAGGAACTTGATCTATCTTACAACGGTTTAATTGGTTCAATACCCAAAGAAATATTTGGGTTGAGGAATCTCACCAAACTGCTTCTTCTTTCCAATGATTTGTCAGGCTATATTCCACCTGATATAGGTAACTGCACAAGTCTCTACAGGTTGAGGTTGAATCACAATAGACTTTTCAGATACCATTCCATCTGA 1443 0.4255 MSRILRNLSLTPKIFSLALLLSINSLFFSCCYSLSEQGQALVAWKNSLNGTADALASWNPLNQSPCNWFGVHCNLQGDVVEINLKSVNLQGSLPSNFQSLKSLKVLVLSSTNITGMIPREIGECQELVSIDLSDNSLFGEIPEELCMLSKLQTLALHTNFLEGSIPSNIGNLSSLVNLTLYDNKLSGEVPNSIGSLTKLQVFRAGGNTDLKGELPWEIGNCTNLVVLGLAVTSISGSLPSSIGMLKRLQTLAIYTTLLSGSIPEEIGNCSELENLYLYQNSISGSIPTQIGKLSKLQNLLLWQNKIVGTIPEGLGSCKELIVIDLSENLLTGSIPVGFGKLSNLQGLQLSVNQLSGTIPPEISNCTSLTQLEVDNNAISGEIPAAVGNLRSLTLFFAWQNKLTGKIPDSLSNCQDLQELDLSYNGLIGSIPKEIFGLRNLTKLLLLSNDLSGYIPPDIGNCTSLYRLRLNHNRLFRYHSI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0136 480 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Dod08g0136 480 Pfam Leucine rich repeat 81 137 IPR001611 GO:0005515
Dod08g0136 480 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Dod08g0136 480 Gene3D Ribonuclease Inhibitor 383 478 IPR032675 -
Dod08g0136 480 Gene3D Ribonuclease Inhibitor 285 382 IPR032675 -
Dod08g0136 480 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Dod08g0136 480 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Dod08g0136 480 Gene3D Ribonuclease Inhibitor 33 182 IPR032675 -
Dod08g0136 480 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 474 - -
Dod08g0136 480 SMART LRR_typ_2 437 461 IPR003591 -
Dod08g0136 480 SMART LRR_typ_2 341 365 IPR003591 -
Dod08g0136 480 SMART LRR_typ_2 293 317 IPR003591 -
Dod08g0136 480 SMART LRR_typ_2 100 124 IPR003591 -
Dod08g0136 480 SMART LRR_typ_2 148 172 IPR003591 -
Dod08g0136 480 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 474 - -
Dod08g0136 480 SUPERFAMILY RNI-like 81 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0136 Dod-Chr8 1545737 1547179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0136 380 476 Receptor kinase-like Gene Family AT4G26540 39.175 3.26e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0136 - - gmx:100813139 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0136 08 1545737 1547179 Dod08g0136 08 1545737 1547179 ECH