Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2248 ATGCGTGTTTGTCGTTTGCATGGCAGATCAAAGTTGCCAAAGGCAACAGGAAAGCTGGGGCAAAGGAGGAGTCCGCGAATATCTGCATTGGAGGCCTATGGCTCATCGGATCAGTCTGAAAATGCAGCTCCTTTTCCTTCTCCTTGCATGAGCCACTTGGATAAGATTCGGAATAACGGCCAGGGACCAGCTGCATTCCAGACTACGGTCGCAAACAAGAGAAAACTGAGGCCAGTTCAAGAGCTCACAGCCACAGCTTCACCTTTGTCTCCCCCAAACCAGGCTGTGAAACATTCCCGCAACCATGGTGTTCTAAAGAAAAGTGATCAACCATTGAAGACACCATCTTCAACTTTTGTCCCAGAGAAAAGAATACTTGAACTTGTCGTCGACACTTTACAAAGAAGAGACACCTATGAAATTTTTGCTGAACCAGTTGATCCAAATGAGGTTGAGGATTATTATACCATCATTGAAGAGCCTATGGATTTTGGCACCATGAGGGCTAAACTACATGAAGGGATGTACAAGAGTCTAGAACAATTTGAGCACGATGTGTTTTTAATATTCAACAATGCAATGCATTTTAATTCTTCTGGTACCATATACTTCAGGCAGGCTCGTGCCATAAATGAACTAGCTAAAAAAGTGTTTGATGTATTAAAAACCAATCCCGAGAAGTTTGAACTGGAGTTCTCTGAAACAAAGCGAAAGGTTGGTCGGAGAAACCCAGGAGGTTTCAGGGATTCAACAGACACGAAATTCAGTGAAATAACTGTTGACGTGTACTCAAAAAGTGTGCCATGCTCGTCCCGTGGTACATTACATCGGAAAAACTTCCAGGCAAATCATGGATGTTCTGACATTGCCAAGCATGTTGATGATAGAGATCTTGAGGTTCATATAGTTACTAAAGATAGTAGCAGACATAGATCTTTTGAGGATGACAAGCGCTCTACATATAGACCTTTGTCCCTTAGTGAGGATGAGTCAATACTTTCCACAGCCTATGGTAAACTGAAACTGCTTGAACGTGTTAATCAGCAAGATGTTGGCTACAGAGATAGCTTAATGTTGTTTGTTAAAGATTTAGGACCAACTGCCCAAAATATAGCCAAGAGAAAATTACTTGGATGTGAAATTCGTACAGCGTCTACTTGTGCCGCATGGAGACCAAAGACTAATTTTAACACTGTTACTTCCCCGACATCTCAATATCCCTTGAAGAGGATTTCTGATCATCCTAATGAGATGAGAAGCCCCAAGGGAAAGATGGATCTGCAGATCGCCCGTGGAGGGGAAACATGCTTACATCAGTGA 1320 0.4265 MRVCRLHGRSKLPKATGKLGQRRSPRISALEAYGSSDQSENAAPFPSPCMSHLDKIRNNGQGPAAFQTTVANKRKLRPVQELTATASPLSPPNQAVKHSRNHGVLKKSDQPLKTPSSTFVPEKRILELVVDTLQRRDTYEIFAEPVDPNEVEDYYTIIEEPMDFGTMRAKLHEGMYKSLEQFEHDVFLIFNNAMHFNSSGTIYFRQARAINELAKKVFDVLKTNPEKFELEFSETKRKVGRRNPGGFRDSTDTKFSEITVDVYSKSVPCSSRGTLHRKNFQANHGCSDIAKHVDDRDLEVHIVTKDSSRHRSFEDDKRSTYRPLSLSEDESILSTAYGKLKLLERVNQQDVGYRDSLMLFVKDLGPTAQNIAKRKLLGCEIRTASTCAAWRPKTNFNTVTSPTSQYPLKRISDHPNEMRSPKGKMDLQIARGGETCLHQ* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2248 439 MobiDBLite consensus disorder prediction 84 116 - -
Dod07g2248 439 SMART bromo_6 115 223 IPR001487 GO:0005515
Dod07g2248 439 MobiDBLite consensus disorder prediction 1 25 - -
Dod07g2248 439 SUPERFAMILY Bromodomain 115 226 IPR036427 GO:0005515
Dod07g2248 439 Gene3D - 90 242 IPR036427 GO:0005515
Dod07g2248 439 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 16 406 - -
Dod07g2248 439 Pfam Bromodomain 129 208 IPR001487 GO:0005515
Dod07g2248 439 PANTHER BROMODOMAIN CONTAINING PROTEIN 16 406 - -
Dod07g2248 439 CDD Bromodomain 122 218 - -
Dod07g2248 439 PRINTS Bromodomain signature 151 167 IPR001487 GO:0005515
Dod07g2248 439 PRINTS Bromodomain signature 167 185 IPR001487 GO:0005515
Dod07g2248 439 PRINTS Bromodomain signature 137 150 IPR001487 GO:0005515
Dod07g2248 439 PRINTS Bromodomain signature 185 204 IPR001487 GO:0005515
Dod07g2248 439 ProSiteProfiles Bromodomain profile. 134 204 IPR001487 GO:0005515
Dod07g2248 439 MobiDBLite consensus disorder prediction 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2248 Dod-Chr7 54304723 54307944 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2248 K22184 - gmx:102667935 447.973