Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2243 ATGTCAGGCTTGTACAATCCCAACTTCTCTCCCGCTAGAGCTGCTTCTCCCCAGGTTAGGAGCGCCCCAGACGTCGTTGACAGCCAGTACCTGTCGGAGTTGCTGGCAGAGCATCAGAAGCTAGGACCCTTCATGCAAGTCCTTCCCATCTGCAGCCGCCTCTTGAATCAAGAAATATTAAGAGTGTCTGGAATGTTATCCAATCAAGGTTTTGGTGACTTTGACAGACTGCGGCATAGAAGCCCTAGTCCTATGGCTTCTTCAAACCTCATTTCAAGTGTCACTGGGACAGGGTTGGGTGGATGGAATAGTCTTCAGCAAGAGAGATTATGTGGAACTCCTGGAATGACAATGGACTGGCAAGTTGCACCTGCAAGTCCTAGTTCATTCACTGTTAAGAGGATTTTGCGCTTGGATATTCCAGTTGATACATACCCCAATTTCAATTTTGTTGGAAGACTTCTGGGACCTAGAGGAAATTCTCTGAAAAGGGTAGAAGCTACTACAGGTTGCCGGGTGTTTATTAGAGGAAAGGGATCAATAAAGGATCCAGACAAGGAAGAGAAATTAAGAGGGAGACCAGGCTATGAACATCTCAACGAGCCACTCCACATTTTAATTGAGGCCGATTTACCTGCTAATATTGTTGACATGAGGCTCAGGCAGGCTCAAGAAATTATAGAAGAATTGCTCAAACCAGTGGATGAATCACAGGACTATGTTAAGAGGCAGCAGTTGCGAGAATTAGCATTGCTGAATTCAAATTTCAGAGAAGATAGTCCTGGGCCCAGTGGTAGTGTGTCTCCATTCAATTCTAGTGGAATGAAACGGGCTAAAACTGGTAGATGA 849 0.4547 MSGLYNPNFSPARAASPQVRSAPDVVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLISSVTGTGLGGWNSLQQERLCGTPGMTMDWQVAPASPSSFTVKRILRLDIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDYVKRQQLRELALLNSNFREDSPGPSGSVSPFNSSGMKRAKTGR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2243 282 MobiDBLite consensus disorder prediction 1 20 - -
Dod07g2243 282 MobiDBLite consensus disorder prediction 1 15 - -
Dod07g2243 282 Gene3D K Homology domain, type 1 24 263 IPR036612 GO:0003723
Dod07g2243 282 ProSiteProfiles Type-1 KH domain profile. 149 206 - -
Dod07g2243 282 SMART kh_6 132 232 IPR004087 GO:0003676
Dod07g2243 282 MobiDBLite consensus disorder prediction 254 282 - -
Dod07g2243 282 MobiDBLite consensus disorder prediction 257 282 - -
Dod07g2243 282 Pfam KH domain 149 185 IPR004088 GO:0003723
Dod07g2243 282 PANTHER RNA-BINDING PROTEIN RELATED 2 282 IPR045071 -
Dod07g2243 282 Pfam Homodimerisation region of STAR domain protein 27 73 IPR032377 -
Dod07g2243 282 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 138 257 IPR036612 GO:0003723
Dod07g2243 282 PANTHER STAR PROTEIN, HOMODIMERIZATION REGION-RELATED 2 282 - -
Dod07g2243 282 CDD SF1_like-KH 137 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2243 Dod-Chr7 54227297 54239826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2243 K14945 - gmx:100797384 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0905 01 16771480 16776999 Dod07g2243 07 54227297 54239826 PCT