Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2145 ATGCATGGCAAAAGTGCTTTTTGTTATTTGCTGGAAAATGATGCCGATGAATTCAGTTCAATCTTAAACCAGCAACAGACTCCTAAGATATTAATCACCACTTGCCGTTTCAATTCTACAATTGTAGAATATGCCAAGAATAAGGACTTCACATCAATTATAGTTGTTCACACGAATTGCCGAGAACCAGATGCTCTCCTAATTATTGGATTGCCTGATGGACCTACTGCACATTTCAAGCTCTCAACGCTTGTTGTACGCAAGGATATCAAGAATCATGGAACTCCAACCAGTCACAAGCCTGAGCTTGTGTCAAACGACTTCACAACAGGTCTGGGGCATCGAATTGGAAGGTCACTCTTCACTCTTATATGCTTTGCTGACTCTAAAGGTAAGAAGGACAAGGAGGGGAAAAGTGAGAATGCTCCTGAACACAAAACAATTGCCCGACTTCAAGAATGTGGCCCTCGTTTCACATTGAAGTTGATTAGCCTGCAGCATGGAACTTTTGACACTAAGGGTGGAGAATATGAGTGGGTTCACAAGGTTTTATCTGCCAAAGGGCTGGTTATCATGAAGTTGCTGCAATCTGTCAACATTTTTCCATAA 609 0.4171 MHGKSAFCYLLENDADEFSSILNQQQTPKILITTCRFNSTIVEYAKNKDFTSIIVVHTNCREPDALLIIGLPDGPTAHFKLSTLVVRKDIKNHGTPTSHKPELVSNDFTTGLGHRIGRSLFTLICFADSKGKKDKEGKSENAPEHKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKVLSAKGLVIMKLLQSVNIFP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2145 202 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 40 182 IPR044281 GO:0006364|GO:0042134
Dod07g2145 202 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 12 40 IPR044281 GO:0006364|GO:0042134
Dod07g2145 202 SMART Brix_2 31 165 IPR007109 GO:0006364|GO:0019843
Dod07g2145 202 ProSiteProfiles Brix domain profile. 1 171 IPR007109 GO:0006364|GO:0019843
Dod07g2145 202 Gene3D - 38 161 - -
Dod07g2145 202 Pfam Brix domain 42 114 IPR007109 GO:0006364|GO:0019843
Dod07g2145 202 PANTHER RIBOSOME PRODUCTION FACTOR 1 40 182 - -
Dod07g2145 202 PANTHER RIBOSOME PRODUCTION FACTOR 1 12 40 - -
Dod07g2145 202 SUPERFAMILY Class II aaRS ABD-related 28 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2145 Dod-Chr7 52894880 52902905 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2145 K14846 - gmx:100791194 263.848