Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2144 ATGGTGGTAGCTGCAAGTTCTAGTGTTTCCAAATTCAATTTGAGAAGAGGGAATGCTTCTGCTCATAGTGTTATGAGTGGTGATAATAAGAGTGATGGAGATCTTTCCAATGTTAGTAGCAGTGAGCGTTATTCATCAATGGTGGAGTTGGATAGAGACCCTTCATGTGTTTCATTCACTACTTTCAATATCTTGGCTCCTATTTACAAACGGCTTGATCCACAGAACCAAAGCCTCCGGGAAAGTGACTTCAGATCACTCTGGTTGGCCAGGAATGAAAGGATTCTGAATTCCTTGCTTTCTGAATCATCTTCCATAATTTGCCTTCAGGAATTTTGGGTTGGAAATGAAGAACTTGATCACATGTATGAGGAGAGACTTGGGGATGCCGGCTACCATCTCTTCAAGCTTGCTCGAACAAACAACCGTGGAGATGGTCTGCTTACTGCTATACACAAAGAATATTTGAGTGTTGTGAATTATCGAGAGTTGCTTTTAGACAAGGGTGGTGATCGTGTTGCTCAGTTGTTACATATTCAGTCAGTTGCCCCCTTCTCAGGAAACCAAAACGGAAGTTTTCATCAAGAGTTTCTAATTGTGAACACCCACTTGTTATTCCCTCACGATTCAAGTCTGTGTATAGTGAGATTGCATCAGGTTCACCAAATATTGCAATATGTGGAATTGTATCAGATAGAAAACAGGCTTAAACCTGTGCCTATTATACTCTGTGGTGATTGGAATGGAAGCAAACGTGGGCATGTCTACAAGTTCCTTCGGTCACAAGGGTTTTTATCATCGTATGATATCGCTAATCAATACACTGACAGTTACGCCGATGCTCACAAGTGGGTTAGTCACCGAAACCATAGAGGAAATATCTGTGGTGTTGACTTCATTTGGCTTTGCAATCCTAACCAAGCACGCAAGCCCTTGAAGACAAGTTGGGCTGAAGCTGTTTTTAGTATCCTAAAGTATCAGTTACGAAAAGCTTCAATGTCCGCAGATGATGCATTTGCCTTTCTGAAGGGTGACAGTTGTGCTGATTCAGTGACATATTTGAGTTTATCTGAAGCACTCCAGAAGGTAAAGTTATTTGGTGTACCTTATGGACTGTCCTTCCAACAGTTGCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAGAAGATTTGGAGTTCTACATGTCCAGATCATGTGTTTGAAAACTTCAATGGTTGTATGGAGGATACTATCACAGAACAGGAGCAGGAAGCCATTGGCTTTAAGGTGACGAATGCAATGTTCTCCCCTCGTGAAGTGGAGAAAGGACTATGGCCAGAAGACTACTCTCTTTCTGATCATGCTAGGTTGACTGCTGTCTTTTCACCAGCAAGGATGAGATGTTATGGATCACAAAACTGTAGCTAG 1440 0.4181 MVVAASSSVSKFNLRRGNASAHSVMSGDNKSDGDLSNVSSSERYSSMVELDRDPSCVSFTTFNILAPIYKRLDPQNQSLRESDFRSLWLARNERILNSLLSESSSIICLQEFWVGNEELDHMYEERLGDAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLLDKGGDRVAQLLHIQSVAPFSGNQNGSFHQEFLIVNTHLLFPHDSSLCIVRLHQVHQILQYVELYQIENRLKPVPIILCGDWNGSKRGHVYKFLRSQGFLSSYDIANQYTDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKYQLRKASMSADDAFAFLKGDSCADSVTYLSLSEALQKVKLFGVPYGLSFQQLQDLWNQADVDGNGVIDFEEFKQKIWSSTCPDHVFENFNGCMEDTITEQEQEAIGFKVTNAMFSPREVEKGLWPEDYSLSDHARLTAVFSPARMRCYGSQNCS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2144 479 SMART efh_1 376 404 IPR002048 GO:0005509
Dod07g2144 479 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Dod07g2144 479 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Dod07g2144 479 Gene3D Endonuclease/exonuclease/phosphatase 37 471 IPR036691 -
Dod07g2144 479 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 473 - -
Dod07g2144 479 SUPERFAMILY EF-hand 352 407 IPR011992 -
Dod07g2144 479 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 18 473 - -
Dod07g2144 479 Pfam Endonuclease/Exonuclease/phosphatase family 88 291 IPR005135 GO:0003824
Dod07g2144 479 SUPERFAMILY DNase I-like 52 287 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2144 Dod-Chr7 52886474 52890748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2144 122 472 EF-hand Containing Proteins AT1G02270 64.103 2.28e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2144 - - gmx:100788191 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2144 07 52886474 52890748 Dod07g2144 07 52886474 52890748 ECH