Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2125 ATGTCTTTGTCTGCAACCAAGCTTGTTCACCCTCTCTCTCTGAGTTCCTCTTCCACTAGATCCAGTGACAAGGCTCTCTCTTCATCATTTTTCTTTGGATCCAACCACCACAAGCATCGCTTCAATGCTCTCTCTAAGACTATTGCTTCTCAGCACCGACCATCATCATCGTCTTCACCTGTTGTTGCTGTCTCCGATGTTGTCAAGGAGAAGAAGCCCAAATCAGCACCCAATCTGCTTATAACTAAAGAGGAAGGATTGGTGCTCTATGAAGACATGGTATTAGGTAGGTCCTTTGAAGACATGTGTGCCCAGATGTATTATAGGGGCAAGATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAAGCTGTGTCAACCGGATTCATCAAGTTTCTTAAGAAGGAAGACTATGTGGTGAGCACCTACCGTGACCATGTTCATGCACTGAGCAAGGGGGTCCCGGCTCGTGCTGTGATGAGTGAACTCTTTGGGAAGGCGACAGGATGCTGCCGAGGCCAGGGCGGTTCCATGCATATGTTCTCGAAAGAGCACAATTTGCTTGGTGGGTTTGCATTCATTGGCGAAGGAATTCCCGTGGCCACAGGGGCAGCATTTTCCAGCAAGTACAGGAGGGAGGTATTGAAAGAGGAAGGTGCTGATGAGGTGGCAGTGGCATTTTTTGGAGATGGGACTTGTAATAATGGGCAGTTCTATGAGTGCCTTAACATGGCAGCTCTCTGGAAATTGCCAATTGTGTTTGTGGTGGAAAACAATTTGTGGGCTATTGGGATGTCACACCTTAGGGCAACTTCAGATCCTCAGATATGGAAAAAAGGCCCAGCATTTGGAATGCCAGGGGTTCATGTTGATGGGATGGATGTGTTGAAGGTCAGAGAGGTGGCAAAGGAGGCAATTGAAAGAGCTAGAAGAGGAGAGGGACCAACTTTAGTGGAATGTGAGACTTACAGGTTTAGAGGACATTCATTGGCTGATCCTGATGAGCTCCGTGACCCTGCTGAGAAAGCACACTATGCTGGCAGGGATCCCATCACAGCATTGAAGAAATATCTTATTGATAACAAGTTAGCCAGTGAACAGGAATTGAAGGCCATAGAGAAGAAAATCGATGAGGTCCTCGATGATGCTGTCGAGTTTGCTGATGAAAGCCCTCTTCCGCCTCGCAGCCAGCTTCTGGAGAATGTCTTTGCTGATCCAAAAGGTTTTGGAATTGGACCAGATGGAAAGTATAGATGTGAGGATCCAAAGTTCACACAAGGCACTGCTCATGTCTAA 1296 0.4699 MSLSATKLVHPLSLSSSSTRSSDKALSSSFFFGSNHHKHRFNALSKTIASQHRPSSSSSPVVAVSDVVKEKKPKSAPNLLITKEEGLVLYEDMVLGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKFLKKEDYVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFSSKYRREVLKEEGADEVAVAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPITALKKYLIDNKLASEQELKAIEKKIDEVLDDAVEFADESPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAHV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2125 431 Coils Coil 362 389 - -
Dod07g2125 431 CDD TPP_E1_PDC_ADC_BCADC 89 387 - -
Dod07g2125 431 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 78 406 IPR029061 -
Dod07g2125 431 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 84 404 IPR017597 GO:0004739|GO:0006086|GO:0043231
Dod07g2125 431 Gene3D - 32 413 - -
Dod07g2125 431 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 3 431 - -
Dod07g2125 431 Pfam Dehydrogenase E1 component 92 393 IPR001017 GO:0016624
Dod07g2125 431 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 3 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2125 Dod-Chr7 52584271 52587475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2125 51 431 Acyl Lipid Metabolism Gene Families AT1G01090 85.302 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2125 K00161 - zju:107423789 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2125 07 52584271 52587475 Dod07g2125 07 52584271 52587475 ECH