Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2124 ATGGAGCTCGACATCCACTCCTTCCTCCCTCACTCCGACGACGACGACGACGACGACAGTCACCGCCACCACCGCACCGTCGAAGACATCCTCAATGACTGCAACTCTTCCTCCTCTCCCTCTCCTCCTTCCTCACCCCTCAAACACTCCCTCCCAACCCACCAAATTCCCCAGACTACCCTCCAGAACCCCCCAACTGAACATTCCAGGCCCGCTTCATTTTCTCGGGCCAAACCCGATGACCCGACCCGAACCCGAGTTTCTCGTCCCTTCTCGTCCTTACTCGCCGGTGTCAGGTCCAACGCGAAACCCGGCGCCGCGCTCGCCGCAGCGGCCGCCGCTTCCAGATCCGCCCCGGCGCCTCATGCGGCGGCTATCAAGTCCCGCCGGAGCTTGCAGAAATTGAGCTCGGGTTCGGTCGCTGACTCTGATGATGTTTCTTCTAGAAGTGAATTGGAATTGGGTGAGCCTGGTGAGAAATCGGAGGGTTTTGGAAGTTCTAGGGTTGATGATGAAATCGGTGAATTGGAAAGGAAAGTTGAGGAATTTGGGGATATTGATAATGAGAGTGTTGGTGTTGATGAGGTTGCAACTGAATTGCATGATGATCGTGGTGGTGGAATTGGTGTGGTGAATGAGGAAAAGAAGGGTTTTGATGAGGTTGGGGATGATTCTGAGAAGAATGTAGTGAATTCTGCACCTTTTGATGATGATGATGATGTTGTTGATGATAATGAGAAGAAGAAGTTTACTACTGATGCTACTACTGGTAGTGTTGTTGTTGATGATGGTGATCTTGATATTGATGCTGGTGATAATAAGAGGATCAATGAGGATGATGATTTGATGAGTAAAGAAGCTATGGAGAGAGAAGGAGTGGTGAATGGTGTTGGTGGTGGTTCTTTTGTGGAAGAAGAGAGTAAGAAGAGTGAGGTGAATTTTGATTTTGATGGTGATGGTGATGATGGTGGTAGTTTGATGAGTGATGAAATTAGTGAGCTACTAGTGGAAGAGAGGCTTGAGGAGCTTGAAAGTAAAAGGGCTGCTAGGAGAGCAGAGAAGAAGAAGGTGAAGTCTTCGAAGAAGCCGCTTGAATTGGCTGAAGAACTGGAGAAGAAGCATGCTTCTACCGGCTTGCATTTGGAGGAGGGTGCTGCTGCGCAGCCGATGCGGTTGGAGGGTGTTCGGAGGGGGTCAACGACATTGGGATATTTCGATGTTGATGCTGATAATGCTGTCACAAGGGGTATCACATCACAAGCATTCAGGCGCGAGCATGGTTCTGCGCAAGTGTTAGCAGTTCATGCTAATTTCATTGCAGTAGGAATGGCCAAGGGGCTCATTGTTGTAGTGCCAAGCAAGTATTCCATTTATCATGCCGACAGCACTGATGGAAAGATGTTGCTGCTTGGTATACAAGGTGATCGAACACATGCTCCAGTAACATCCATGTCTTTCAACCTGCAAGGGGACCTTCTTTTAGCTGGTTACGGTGATGGTCATGTTACTCTTTGGGATGTACAGAAAGGTGTAGTGGCGAAAGTTATTAGTGGAGAGCACACATCACCAGTAGTGCATGCATTCTTTCTTGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCAGTTACTGGTGATTGTAAGGGTCTGGTTCTCTTACACACTATCTCAGTGGTCCCTTTGCTTAATAGGTTCTCCATCAAAACACAGTGTCTTCTTGATGGGCAAAAAACGGGCTTAGTGCTGTCAGCTTCACCTCTCCTTCCTGATGAATTTAGTGGAAGTGCTTCACCTTATTCCCAGGGGAACACCATGGTCTCTGCCAGCAGTATAAGTAGCATGGTGGGTGGTGTTGTTGGCGGAGATACAGGTTGGAAACTCTTCAATGAAGGCTCTTCTTTGGTGGATGAAGGTGTTGTCGTATTTGTCACCCATCAGACTGCTTTGGTGGTACGGCTGAGTCCTACACTGCAAGTTTATGCTCAACTTTCTAGGCCAGATGGAATTCGGGAGGGTTCCATGCCATATACTGCATGGAAATACATGGCGGCACAAGCATGTAGTTCTGCTGAAAGTACATCTGCGGAAACTGTTGAAAGAGTTTCATTGCTTGCAATTGCCTGGGAACGAAAAGTTCAGGTTGCAAAGTTGGTCAAATCTGAACTAAAAGTATATGGAAAATGGTCTCTTGACAGTGCAGCCATAGGTCTGGCTTGGTTGGATGACCAGATGTTGGTAGTTCTCACTTCCACTGGACAGCTGTATTTATTTGCTAAGGATGGAACTGTGATTCACCAGACAAGTTTTGCTGTAGATGGTATTGGAGGAGATGATCTGATTTCTTATCATACTCACTTCATCAATGTATACGGAAACCCTGAGAAAGCATATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTATATACTTGGTCCAACACATCTTGTTGTTTCCCGACTTCTTCCTTGGAAAGAACGCATTCTGGTATTGCGGAAAGCGGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGACCTTCCTAGAACATTGGATGCTATACATGAAGCCATAATGCCCTTCTTGGTGGAGTTGCTTACATCATATGTTGATGAAGTGTTCTCCTATATATCAGTGGCATTCTGCAATCAAATTGGAAAATTGGATCAATCCAGTGATTCAAATAGCAGAAACAATTCAGTGCATTCTGAGATAAAGGAGCAGTACACCCGTGTTGGTGGAGTAGCTGTTGAATTCTGTTGTCATATCAAAAGGACAGATATCCTTTTTGAAAAAATCTTCTCCAAGTTCATAGATGCTAATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAGCCATATATTCTGAAGGACATGCTTGGATCTCTACCACCCGAGATTATGCAAGAATTGGTAGAATATTATAGTGCCAAAGGGTGGTTACAGCGGGTTGAGCAGTGTGTACTTCACATGGATATTTCATCCTTGGATTTTAATCAGGTTGTCAGATTATGCCGGGAGCATGGACTATATAGTGCTTTGGTGTATCTATTTAATAAAGGATTAGACGACTTTAGGGCACCTCTTGAGGAGCTGTTTGCAGTCTTACAAAATAGCCAAAACAAAAGTGCTAGTGCACTTGGGTACAGAATGCTGGTTTATCTCAAGTACTGCTTTACAGGCCTGGCTTTTCCACCAGGTCGCGGAACTATTCCTCCTACACGCTTGCAATCTCTTAGAAAAGAACTTGTAGAGTTCTTGTTAGAGAAATCTAATGCTCTGAAACCACAGACAAATTTAAATGTGTCCAGAGGACCCTATCTGAATCTATATCTTCTCGTAGAGTTAGACACTGAGGCTACATTAGATGTCCTCAGATGTGCATTTGTCGAAGATGAAAATTCAATTGCCTGCTCATCTTCACTGAATTCAGTCGATCAATCTGTTGAGGAAGCAAAAAAAGAAAATAATAAGATCACTGAACCTCGAAATACTTTGGTTCAGAACACGGTAGATGCTCTTACTCAACTAATTGATATGAAAGTTGTTTCAATGGATACAACCTCTAGCAGTAGTGATGATGGGTTGATAAAAGAGTGGCCTTTGAAGGACATAGGTTATCTGTTTGAGTTCATTGCATATTATGTTGCTCTCCAAAGGGCTAAAGTCTCCAAGGGTGTACTGTGTCAAATACTGGAATATTTGACATCGGATAGGTACTATGCAACTAATGTTTCTGTTCACAGTTCAACTCCCAAAAAAGGAGAGAGGCAAGTGCTTGCACTTTTGGAAGTACTGCCTGAATCAGAGTGGGATGCATCATATGTGCTAGAACTTTGTGAGAGAGCCCAATATTACCAGGTTTGTGGATTCATTCATACCATCCGACATAAGTATGTGGCTGCATTGGAAAGTTACATGAAAGATGTAGATGAGCCTGTTCATGCCTTCTCCTTTATCAACAAAATGTTCTTACAGTTGACTGACAACAACCATGCTGCTATTCGATCAGCTGTCATATCTCGAATTCCTGAGTTGGTTGAACTAAGCAGGGAGGGCACGTTCCATATGGTTATCAGTCATTTTAGTGATGAAAATTCTCGCATCATCACTGAACTTCAGTCTCATCCAAGAAGTTTGTTCTTTTATTTAAAGACACTCATTGAGCTTCACTTGTTTGGCACCCTAGACTTGTCTAATTTGAGAAAGGATTATACCATGAATCTTCCTAATGGAAAGCGTGTTAAGGACCACACACAAGGACTCAGTGATTACTTAGAGAATATATCTAATTTCCCCAAGTACATTCGTGAAAATCCTATTCATGTGCCTGATGATCTTATTGAGCTTTATCTAGAGTTACTATGCCGGTTTGAAGGCAGTTCAGTTCTCAAGTTTCTCGAAATGTTTGATAGCTATCGTGTGGAACATTGTTTACGCTTGTGCCAACAATATGGCATTATAGATGCTGCTGCTTTCTTACTGGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTGACACTTTCTGATCTGAATGATAAATTTATCAAACTTGATACTGCTCTGGAAGCTTTAGTCTCAAGTCGCTCCTTACGTGGTTCTTCCCATATGAAAGTTTTCAACACTGTTTTAAGAATGAAGGAGGTGAATGACATGAACAATTTATTGCATGCCTGTATTGGTCTGTGCCAGCGGAACACCCCTCGTCTAAACCCGGCAGAGGCAGAGGCTCATTGGTTTAAATTACTTGACTCGTTTTGTGACCCATTGATGGAGTCATATGTTGAAGAGAGACCATATGAAAGAAAAAATTATTTTGGAATGCTAGCTGGATCAGCAGATTCACAACTGGACAAAGGTAGCTGTAAAAGCAGTTGGAAAATCTCGAATTCTCGTAATGCTCATATTTTGAGAAAATTGCTAAGCCAGTTCATTAAAGAGATTGTTGAGGGAATGCTAGGTTTTGTTCACCTTCCAACTATCATGTCCAAACTCCTGTCTGATAATGGTAGTCAAGAATTTGGGGATTTCAAACTTACCATATTGGGCATGCTGGGAAGATATGGCTTTGAAAAAAGAATACTGGATGCCGCAAAATCCTTGATAGAGGATGATACGTTTTATACTATGAGTTTACTTAAGAAAGGGGCCTCTCATGGATATGCTCCCAGGAGTGTAATGTGTTGTATTTGTAATGGCCTTCTTACAAAGAACTCTGTTAGCTCTGGAATTCGAATTTTCAGTTGTGGCCATGCAACTCATTTACATTGTGAAGGTCTTGAAATTGAGTCATCAGGCAAAGGAACTTCATCTGGATGTCCTGTGTGCATGCCTAACAAGAAATCCAAGCAGTCTAGAAACAAATCAGTCATTGCAGACAATGGCTTGATCAACAAATTCTCCTCAAGACGTCAACACCCTCACGGAAGCACCATTCATCCGCATGAAAGTGATTTATTAGAGAATATTTATGGGCATCAACAGATATCACGGTTTGAGATCTTGAACAGCTTGCAGAAAAATGAGAGATTTATTCAAATAGAAAACTTGCCTCAGTTGAGGCTTGCCCCGCCTGCTGTGTACCATGAAAAGGTAAATAGAGTAACAGATTTTCTGGCTGGGGAAAGTAGCAACAGTTCTGCAGTTGTGGAGAAACAAAGTAGAAACAAGCAAAACCGGGAGCTTAGAGTTAAGGGTTCATCAATTCGGTTTCCTTTGAAATCAAGTATATTTGCAGGCAAGGACAAGACAAATAAGAGGTGA 5802 0.4307 MELDIHSFLPHSDDDDDDDSHRHHRTVEDILNDCNSSSSPSPPSSPLKHSLPTHQIPQTTLQNPPTEHSRPASFSRAKPDDPTRTRVSRPFSSLLAGVRSNAKPGAALAAAAAASRSAPAPHAAAIKSRRSLQKLSSGSVADSDDVSSRSELELGEPGEKSEGFGSSRVDDEIGELERKVEEFGDIDNESVGVDEVATELHDDRGGGIGVVNEEKKGFDEVGDDSEKNVVNSAPFDDDDDVVDDNEKKKFTTDATTGSVVVDDGDLDIDAGDNKRINEDDDLMSKEAMEREGVVNGVGGGSFVEEESKKSEVNFDFDGDGDDGGSLMSDEISELLVEERLEELESKRAARRAEKKKVKSSKKPLELAEELEKKHASTGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDADNAVTRGITSQAFRREHGSAQVLAVHANFIAVGMAKGLIVVVPSKYSIYHADSTDGKMLLLGIQGDRTHAPVTSMSFNLQGDLLLAGYGDGHVTLWDVQKGVVAKVISGEHTSPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLLHTISVVPLLNRFSIKTQCLLDGQKTGLVLSASPLLPDEFSGSASPYSQGNTMVSASSISSMVGGVVGGDTGWKLFNEGSSLVDEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGIREGSMPYTAWKYMAAQACSSAESTSAETVERVSLLAIAWERKVQVAKLVKSELKVYGKWSLDSAAIGLAWLDDQMLVVLTSTGQLYLFAKDGTVIHQTSFAVDGIGGDDLISYHTHFINVYGNPEKAYHNSVAVRGASIYILGPTHLVVSRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAIHEAIMPFLVELLTSYVDEVFSYISVAFCNQIGKLDQSSDSNSRNNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFEKIFSKFIDANVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSAKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLDDFRAPLEELFAVLQNSQNKSASALGYRMLVYLKYCFTGLAFPPGRGTIPPTRLQSLRKELVEFLLEKSNALKPQTNLNVSRGPYLNLYLLVELDTEATLDVLRCAFVEDENSIACSSSLNSVDQSVEEAKKENNKITEPRNTLVQNTVDALTQLIDMKVVSMDTTSSSSDDGLIKEWPLKDIGYLFEFIAYYVALQRAKVSKGVLCQILEYLTSDRYYATNVSVHSSTPKKGERQVLALLEVLPESEWDASYVLELCERAQYYQVCGFIHTIRHKYVAALESYMKDVDEPVHAFSFINKMFLQLTDNNHAAIRSAVISRIPELVELSREGTFHMVISHFSDENSRIITELQSHPRSLFFYLKTLIELHLFGTLDLSNLRKDYTMNLPNGKRVKDHTQGLSDYLENISNFPKYIRENPIHVPDDLIELYLELLCRFEGSSVLKFLEMFDSYRVEHCLRLCQQYGIIDAAAFLLERVGDVGSALSLTLSDLNDKFIKLDTALEALVSSRSLRGSSHMKVFNTVLRMKEVNDMNNLLHACIGLCQRNTPRLNPAEAEAHWFKLLDSFCDPLMESYVEERPYERKNYFGMLAGSADSQLDKGSCKSSWKISNSRNAHILRKLLSQFIKEIVEGMLGFVHLPTIMSKLLSDNGSQEFGDFKLTILGMLGRYGFEKRILDAAKSLIEDDTFYTMSLLKKGASHGYAPRSVMCCICNGLLTKNSVSSGIRIFSCGHATHLHCEGLEIESSGKGTSSGCPVCMPNKKSKQSRNKSVIADNGLINKFSSRRQHPHGSTIHPHESDLLENIYGHQQISRFEILNSLQKNERFIQIENLPQLRLAPPAVYHEKVNRVTDFLAGESSNSSAVVEKQSRNKQNRELRVKGSSIRFPLKSSIFAGKDKTNKR* 1934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2124 1933 PANTHER VACUOLAR PROTEIN SORTING VPS41 288 1860 IPR045111 GO:0006623
Dod07g2124 1933 MobiDBLite consensus disorder prediction 1 30 - -
Dod07g2124 1933 ProSiteProfiles Zinc finger RING-type profile. 1741 1789 IPR001841 -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 130 145 - -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 261 281 - -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 146 186 - -
Dod07g2124 1933 PANTHER - 288 1860 - -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 267 281 - -
Dod07g2124 1933 Pfam Golgi CORVET complex core vacuolar protein 8 958 1141 IPR025941 -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 31 70 - -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 194 234 - -
Dod07g2124 1933 CDD RING-H2 1741 1790 - -
Dod07g2124 1933 Gene3D - 385 563 IPR015943 GO:0005515
Dod07g2124 1933 SUPERFAMILY RING/U-box 1740 1790 - -
Dod07g2124 1933 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1406 1565 IPR000547 GO:0006886|GO:0016192
Dod07g2124 1933 ProSiteProfiles Trp-Asp (WD) repeats profile. 481 515 IPR001680 GO:0005515
Dod07g2124 1933 MobiDBLite consensus disorder prediction 1 246 - -
Dod07g2124 1933 Coils Coil 340 360 - -
Dod07g2124 1933 ProSitePatterns Trp-Asp (WD) repeats signature. 493 507 IPR019775 -
Dod07g2124 1933 MobiDBLite consensus disorder prediction 1889 1911 - -
Dod07g2124 1933 SUPERFAMILY WD40 repeat-like 432 766 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2124 K20178 - gmx:100780869 2704.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2124 07 52571487 52582165 Dod07g2124 07 52571487 52582165 ECH