Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2084 ATGGCCAACTTAGTCACCTTGTTCATGCTGTGGTTGAGCATGATTTCTACTATCTACAATGTGAAACTCATGGCATGTGGAAGTACCTGGGGTGAACCAACCAGATTCTATGATTTCAAGGTACAAACTAAAAGAGTCACCAAACTCTGCAACACAAAGGACATTGTCACAATTAATGGTATGTTTCCAGGACCTGTGGTTTATGCCCAAGAAGATGATAGAATCATAGTCAAAGTTACCAATAAGACGCCTTTCAATATTACAATTCACTGGCATGGTGTCCGGCAAAGGCTATCATGTTGGTATGATGGACCATCCTTTATTACACAGTGTCCAATTCAAGCAGGCCAGAGTTTCACCTATAATTTTTCAGTGGTGAAGCAGAAGGGCACATTCTTTTGGCATGCTCATGTTTCTTGGCTAAGAGGAACAGTTTATGGTGCAATGGTTGTTTATCCAAAGTCCAGGGTACCTTACCCATTCAAGACTCCCTATCAGGAGCACATAATCATACTAGGAGAGTATTGGCTGCAGGATCTCCAACAAATTGAGCATGCCACTCTAGCAAGTGGAGGAGCTCCTCCTAAAGCAAATGCATTTACCATCAATGGTCATCCGGGCCCCAACTACAACTGCTCTGCTAATGATGTCTACCAACTTGATGTGATTGCGGGGAAGACCTATTTGTTAAGGCTGATTAATGCTGGTTTGAACACTGAGAACTTCTTTGCCATTGCTAATCACAAATTAACAATAGTGGAAGCTGATGCTGAGTATACAAAACCATTCACCACAGACACGGTGATGATTGGACCAGGCCAAACATTGAATATCCTTGTCTCTGCTGACCAACCTGTGGCAAAATACTCCATGGCCGTGGCACCTTACAAGTCTGGCAGGATTGTTAATTATCAAAACATTTCAGCCATTGCCTGCTTCAACTATAGAGGTGCTGCATCTGATGGCTTATATTTGCCAGCTAAATTACCCAAACTTGATGATAAACTGGCTGTTAAGACATTCATGGATGGATTAAGGAGCCTAAATAAAGTCAACGTTTTCAAAGAAGTAGATAAAAACCTATTCATCACCATTGGATTGAATGTTCAGAAGTGTCATTCGAAGACACCAAAGCAGAACTGTCAAGCCATGAATAATGGAGTGCTGGCAGCTTCAATGAACAACATAAGTTTTGTTCATCCCAACATTTCAATCCTGGAAGCTTATTATAAGAAGATAAAAGGATCATATACTGAAGATTTTCCGGATGCACCCCCTAAGCTCTATGATTTTGTCAATGGTGCACCTAATAACATTCCATATGACACACAGTCAGTGAATGGGACTAGAACAAAGGTCCTTGATTATGGTAGCAAGGTGCAACTCATCCTGCAGGATACAGGGACAGTAAACATTGAAAACCACCCAATGCACTTCCACGGCCACAGCTTTTATGTCGTAGGCTATGGCACAGGGAACTATAACCCGCTGACTGCAAAATTCAACCTAGTGGATCCTCCATACATGAGCACAATTGGAGTTCCAGTGGGTGGATGGGCAGCAATTCGCTTTGTAGCTGATAATCCAGGGGTGTGGTATATGCACTGCCACATTGATATACACCAGACATGGGGACTAGGCATGGTATTTATAGTTAACAACGGAAAAGGAGAGTCAGAGTCCTTACCACCACCTCCAGCAGACCTGCCACGGTGTTAA 1719 0.4264 MANLVTLFMLWLSMISTIYNVKLMACGSTWGEPTRFYDFKVQTKRVTKLCNTKDIVTINGMFPGPVVYAQEDDRIIVKVTNKTPFNITIHWHGVRQRLSCWYDGPSFITQCPIQAGQSFTYNFSVVKQKGTFFWHAHVSWLRGTVYGAMVVYPKSRVPYPFKTPYQEHIIILGEYWLQDLQQIEHATLASGGAPPKANAFTINGHPGPNYNCSANDVYQLDVIAGKTYLLRLINAGLNTENFFAIANHKLTIVEADAEYTKPFTTDTVMIGPGQTLNILVSADQPVAKYSMAVAPYKSGRIVNYQNISAIACFNYRGAASDGLYLPAKLPKLDDKLAVKTFMDGLRSLNKVNVFKEVDKNLFITIGLNVQKCHSKTPKQNCQAMNNGVLAASMNNISFVHPNISILEAYYKKIKGSYTEDFPDAPPKLYDFVNGAPNNIPYDTQSVNGTRTKVLDYGSKVQLILQDTGTVNIENHPMHFHGHSFYVVGYGTGNYNPLTAKFNLVDPPYMSTIGVPVGGWAAIRFVADNPGVWYMHCHIDIHQTWGLGMVFIVNNGKGESESLPPPPADLPRC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2084 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Dod07g2084 572 PANTHER LACCASE-6 16 572 - -
Dod07g2084 572 SUPERFAMILY Cupredoxins 30 176 IPR008972 -
Dod07g2084 572 SUPERFAMILY Cupredoxins 355 572 IPR008972 -
Dod07g2084 572 TIGRFAM laccase: laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Dod07g2084 572 Pfam Multicopper oxidase 167 318 IPR001117 -
Dod07g2084 572 SUPERFAMILY Cupredoxins 163 320 IPR008972 -
Dod07g2084 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Dod07g2084 572 Gene3D - 165 350 IPR008972 -
Dod07g2084 572 Gene3D - 23 153 IPR008972 -
Dod07g2084 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Dod07g2084 572 Pfam Multicopper oxidase 421 555 IPR011706 GO:0005507|GO:0016491
Dod07g2084 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Dod07g2084 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Dod07g2084 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Dod07g2084 572 Gene3D - 370 572 IPR008972 -
Dod07g2084 572 PANTHER MULTI-COPPER OXIDASE 16 572 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2084 Dod-Chr7 51957319 51959907 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2084 K05909 - gmx:100789406 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2084 07 51957319 51959907 Dod07g2084 07 51957319 51959907 ECH