Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2082 ATGCCAGCGTTACTCGCCTCGAACACCCCATCAAAAACGCAGTCGTTCCGCGAGTTCCTCGCCGAATCGCCGCGAAAAAACGACCCCTCCGGCGACCGGAACCCTTCTCCGGCGGCGGCGGCGAAACGAGCCCCCAATCGACCCCCGGAAAATCTGGCCGGCGACGGCGACGACCACAACCCGGACTTGGGTCCGTTTCTTCTGAAGATGGCCCGAGACACAATTCATTCGGGTCATGACCCGAATAAGGCCTTAGGCTACGCAATTCGGGCCTCAGGACATTTTGAACTGGCTTTGGGTCCGGGTTCGGATCTTGCCACGTGCCTGCACGTGATTGCTGCTATACAGAGCGGGTTGGGGCGGTTTGATGAAGCGGTTGAGGCTTTGGAACGGTCAATTTTGATGCTCAATGGTGAAAACGGGTTGGGTCATGATTCGGGTTCGGGTCATGTTCAAGGTTCGGGCCATGAGATGGTTAAGTTTGCAGGGTTGATGCAGCTTGGGGACACTTACTCAATGATTGGGCAGGTGGATAGGTCCATTTTGTGTTATGAGTCGGGTCTGAAGATCCAAATGGAGGCTTTGGGTAAATCCGACCCGAGAGTTGCTGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCCATGCAATTTGATGAGGCTGAGAACTTCTGCAAGAGGACCCTCGAAATTCATAGGGAGCATTGCTCACCTGCTTCCCTTACAGAAGCAGCGGACAGGCGTCTTATGGCCCTAATATTTGAGGCAAAGGGTGATTATGAACCAGCACTTGAGCACCTCGTCCTAGCAAGTATGTCAATGATTGCTCATGGGCAAGACAATGAAGTTGCGGCCATCGATGTTAGCATTGGCGATATTTACTTGTCACTCTGTCGTTTCGATGAGGCTGTTTTCGCCTATCAGAAAGCACTAACAGTGTTCAAATCCACCAAGGGTGAAAATCACAGTTCCGTGGCATTGGTGTACATTCGCCTTGCTGACCTTTACTACAAGACAGGAAAATTGCGAGAGTCGAAATCCTATTGCGAAAATGCCTTAAGAATATACTCTAAACCTATGCATGGAACCACCTCTGGAGAGATTGCAAGTGGACTGACCGAAATCTCCACCATCTATGAAGCTCTAAACGAGCCTGAGGAAGCACTGAAGCTCTTGCAGAAGGCAGTGAAGTTATTGGAGAATATCCCTGGACAATATAGGACAGTGGCAGGAATAGAAGCACAAATGGGAGTTATGTTCTACATGGTTGGCAGGTATATGGAAGCTAGGAAATCTTTTGAGAGTGCTATCACAAAGCTAAGAGCAAGCGGGGAGAGGAAATCGGCATTTTTTGGATTTGTATTGAACCAGATGGGCCTGGCGTGCGTGCAACTGTTTAAAATAGGTGAGGCTGCCGCTCATTTTGAAGAGGCCAGAGAGATATTGGAGCAGGAGTGTGGAACATATCATTTGGATACTCTTGGAGTGTATAGCAATCTTGCAGCAACTTATGATGCCATGGGAAGAGTTGAAGATGCCATTGAGATATTGGAATACATACTCAAAATGAGAGAAGAAAAACTTGGAACAGCAAATCCAGATGTTGATGATGAAAAGAAAAGACTATTTGAGCTATTGAAAGAAGCAGGAAGAGTTCGAAATAGAAAGGGAAAATCACTTGAAAATCTTATAGAATCCAACTCCTTAAAGATGAAGAAGGAAGGGAAGAAAAAGAAATGGGGTGCATTTGGTTTGAGAACTTAA 1767 0.4754 MPALLASNTPSKTQSFREFLAESPRKNDPSGDRNPSPAAAAKRAPNRPPENLAGDGDDHNPDLGPFLLKMARDTIHSGHDPNKALGYAIRASGHFELALGPGSDLATCLHVIAAIQSGLGRFDEAVEALERSILMLNGENGLGHDSGSGHVQGSGHEMVKFAGLMQLGDTYSMIGQVDRSILCYESGLKIQMEALGKSDPRVAETCRYLAEAHVQAMQFDEAENFCKRTLEIHREHCSPASLTEAADRRLMALIFEAKGDYEPALEHLVLASMSMIAHGQDNEVAAIDVSIGDIYLSLCRFDEAVFAYQKALTVFKSTKGENHSSVALVYIRLADLYYKTGKLRESKSYCENALRIYSKPMHGTTSGEIASGLTEISTIYEALNEPEEALKLLQKAVKLLENIPGQYRTVAGIEAQMGVMFYMVGRYMEARKSFESAITKLRASGERKSAFFGFVLNQMGLACVQLFKIGEAAAHFEEAREILEQECGTYHLDTLGVYSNLAATYDAMGRVEDAIEILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRNRKGKSLENLIESNSLKMKKEGKKKKWGAFGLRT* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2082 588 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 37 588 - -
Dod07g2082 588 ProSiteProfiles TPR repeat profile. 495 528 IPR019734 GO:0005515
Dod07g2082 588 ProSiteProfiles TPR repeat profile. 370 403 IPR019734 GO:0005515
Dod07g2082 588 ProSiteProfiles TPR repeat profile. 285 318 IPR019734 GO:0005515
Dod07g2082 588 Gene3D Tetratricopeptide repeat domain 272 449 IPR011990 GO:0005515
Dod07g2082 588 MobiDBLite consensus disorder prediction 1 65 - -
Dod07g2082 588 Pfam Tetratricopeptide repeat 105 133 - -
Dod07g2082 588 Pfam Tetratricopeptide repeat 202 239 - -
Dod07g2082 588 MobiDBLite consensus disorder prediction 1 18 - -
Dod07g2082 588 Gene3D Tetratricopeptide repeat domain 450 581 IPR011990 GO:0005515
Dod07g2082 588 Pfam Tetratricopeptide repeat 284 358 - -
Dod07g2082 588 Pfam Tetratricopeptide repeat 456 527 - -
Dod07g2082 588 Gene3D Tetratricopeptide repeat domain 58 271 IPR011990 GO:0005515
Dod07g2082 588 PANTHER KINESIN LIGHT CHAIN-LIKE PROTEIN 37 588 - -
Dod07g2082 588 SUPERFAMILY TPR-like 97 531 IPR011990 GO:0005515
Dod07g2082 588 Pfam Tetratricopeptide repeat 373 399 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 106 139 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 161 194 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 453 486 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 495 528 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 327 360 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 411 444 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 370 403 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 285 318 IPR019734 GO:0005515
Dod07g2082 588 SMART tpr_5 203 236 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2082 Dod-Chr7 51941486 51946174 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2082 - - gmx:100794697 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2082 07 51941486 51946174 Dod07g2082 07 51941486 51946174 ECH