Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2058 ATGGCATCTTGCATCTTCTCTCAGTACCAATGCCTTATGGATAATAAGCTAGCACCTTTTCATCATCTTAATCCTTATTCTCTTCACACCCCACAAACCCAAATGCCACCAAGAAGCCATTATTCACCAACTTCAACTTCTATTGGAATGTCAGATACAAAGGTTTTCAATGCTACCCTATTTGCCTCACCAAAGCTTTCTCCTTCCCTTCACTTTTTGGATGACTTGTGTGGGATAAGGACTTTGAATTCTGTAAGGGAACTGCATGCACTGATGCTGAAAATGCCAAACAAGGGGAATTTGGCTACAATGGATGGCACCATGATGAGATACTACTATGAGTTTGGTGATTTTCTGTCGGCGACAAAAGTGTTCTTTGTTGGTTTTGCAAGGAACTATCTTCTATGGAACTCTTTTCTTGAGGAGTTTGGAAGTTTTGGAGGTGATCCTTATGAGATTCTGGGGGTTTTCAAGGAATTGCATAAGAAAGGAGTGGAATTTGATAGCGTAGCTCTTACTGTTGTCCTGAAGATTTGCTTGTTTTTGATGGACTTGTGGGTTGGATTGGAGATTCATGTTTGGTTGGTCAAGAGGGGCCTCCATTTTGATGTACACTTGAGTTGTGCATTGATCAATTTGTATGAGAAGTGTTGGGGTATAGATAGAGCAAATCAAGTGTTTGATGAGACCCCTCACAAAGAAGGTTTCTTGTGGAACACAATAATTATGGCTAACTTGAGGAGTGAGAGGTGGTTGAATGCTTTAGAATTGTTCCGCGGCATGCAGTTATCTTCAGCCAAAGCCACTGGTGCCACCATTGTCAAGCTGCTGCAAGCATGTGGAAAATTAAGAGCCCTCAATGAAGGGAAGCAGATTCATGGGTATGTTTTAAGGCTAGGACTTGTGTCAAATACTTCAATTTGCAATTCCTTAATTAGCATGTACTCTAGAAACAATAGACTCAAACTAGCTAGAGCAGTTTTCGATTCAATGGAGGATCACAACTTGTCATCTTGGAACTCAATAATTTCGAGTTATGCAGCTCATGGCTGTTTGGATGATGCCATGAATATCTCCCAAGAAATGGAATCTTCCAGCATTAAACCAGACATTATTACCTGGAATTCTCTTTTGTCAGGCCATCTTGTTCAGGGATCATATGAAATAGTTCTCGCCAATTTCCGGAGCCTACAACGCACAGGCTTAAAGCCAGATTCTTGCTCGGTAACTAGTGCACTGCAAGCAACTATTGAATTGTGTTTCTTTAAGTTAGGGAAAGAAATACACGGTTACATATTGAGAAACAAGCTTGATTATGATGTTTATGTTTGTACTTCATTGGTGGATATGTATATCAAGAATGATAGCCTAGAAAACGCTCAAAAAGTGTTCCATCATGCAAAGAACAAAAACATTTGTGCTTGGAATTCATTGATATCAGGGCACTCTTTCAAGGGCCAGTTTAGTGATGCTGAAGGACTATTAAACAAAATGGAGGAGGAAGGTATAGAACCTGATTTGGTAACATGGAATAGTTTGATTTCAGGTTACTCAATGTGGGGCCGTAGCGAGGAAGCTATGGATGTGATTAATAGGATGAAGAGTTTGGGATTTGCTCCAAATGTGGTTTCCTGGACTGCTATGATATCAGGCTGTTGTCAGAATGAGAACTACATGAATGCCCTACAGTATTTCAGCCAAATGCAAGCAGAAAATGTAAAGCCTAACTCTACTACCATTTGCAGCTTGCTTCATGCATGCGCAGGCCCATCGCTGTTAAAGAAAGGAGAAGAGATACACTGCTTCAGCATAAGGCTTGGGTTTGTGGATGAAATATATATAGCCACAGCCCTCATTGACATGTATAGTAAGGCAGGAAAATTAAAAGCAGCTTGTGAGGTTTTCAGTAGAATTCAGGAAAAGACACTGGCGTGTTGGAACTGCATGATGATGGGGTATGCAATTCATGGCCATGGGGAAGAAGTAATGATTCTTTTCGCCAAAATGCATGGAACAGGTATCAGACCTGATGCTATTACCTTCACAGCTCTCCTGTCTAGCTGCAAGAATTCAGGTCAGGTTGAAGAGGGGTGGAAATACTTTGACAGTATGAGTACAGATTACAATATTAGTCCAACAATTGAGCACTACTCTTGCATGGTTGACCTGCTTGGAAAAGCCGGTTTTCTTGATGAAGCTTTGCATTTTATCCAAACCATGCCGGTGAAGCCGGATGCTAGCATTTGGGGTGCTCTTCTTGCATCCTGCAGAATTCACAAAAACATCATGCTAGCTGAGATTGCATCAAGGAATCTCTTCAAGTTAGAGCCATATAATTCTGCCAACTATGTGCTGATGATGAATGTATATTCTGCTTTAGACAGATGGAAGGACGTGGAGCGCCTTAAAGGCAAGATGGCTGCTGTGGGGGTGAAAGTTCCTCATGTTTGGAGCTGGATACAAGTTGATCAGGCCATTCATGTGTTCTCCACAGATGGGAAATCACATCCAGAAGAAAGCGAAATATATTTTGAGTTATACCAATTAGTTTCTGAGATACAAAGGCTAGGATATGCACCTGATATTAGTTGTGTATATCAGAACATTGATGACAAAGATAAGGGGAAGGTTCTGCTTAGTCACACCGAGAAGCTAGCTATGGCATATGGACTAATGAAAACAAAAGGGGCATCGCCTATCAGGGTAGTTAAGAACACAAGAACTTGTCAGGACTGTCATACAGCAGCAAAGTACATTTCTTTGGCTCGAAACTGCGAGATTTTCCTCAGAGATGGTGGTCGTTTCCACCATTTTATAAATGGAAAATGCTCTTGTAATGATTGTTGGTAA 2850 0.4105 MASCIFSQYQCLMDNKLAPFHHLNPYSLHTPQTQMPPRSHYSPTSTSIGMSDTKVFNATLFASPKLSPSLHFLDDLCGIRTLNSVRELHALMLKMPNKGNLATMDGTMMRYYYEFGDFLSATKVFFVGFARNYLLWNSFLEEFGSFGGDPYEILGVFKELHKKGVEFDSVALTVVLKICLFLMDLWVGLEIHVWLVKRGLHFDVHLSCALINLYEKCWGIDRANQVFDETPHKEGFLWNTIIMANLRSERWLNALELFRGMQLSSAKATGATIVKLLQACGKLRALNEGKQIHGYVLRLGLVSNTSICNSLISMYSRNNRLKLARAVFDSMEDHNLSSWNSIISSYAAHGCLDDAMNISQEMESSSIKPDIITWNSLLSGHLVQGSYEIVLANFRSLQRTGLKPDSCSVTSALQATIELCFFKLGKEIHGYILRNKLDYDVYVCTSLVDMYIKNDSLENAQKVFHHAKNKNICAWNSLISGHSFKGQFSDAEGLLNKMEEEGIEPDLVTWNSLISGYSMWGRSEEAMDVINRMKSLGFAPNVVSWTAMISGCCQNENYMNALQYFSQMQAENVKPNSTTICSLLHACAGPSLLKKGEEIHCFSIRLGFVDEIYIATALIDMYSKAGKLKAACEVFSRIQEKTLACWNCMMMGYAIHGHGEEVMILFAKMHGTGIRPDAITFTALLSSCKNSGQVEEGWKYFDSMSTDYNISPTIEHYSCMVDLLGKAGFLDEALHFIQTMPVKPDASIWGALLASCRIHKNIMLAEIASRNLFKLEPYNSANYVLMMNVYSALDRWKDVERLKGKMAAVGVKVPHVWSWIQVDQAIHVFSTDGKSHPEESEIYFELYQLVSEIQRLGYAPDISCVYQNIDDKDKGKVLLSHTEKLAMAYGLMKTKGASPIRVVKNTRTCQDCHTAAKYISLARNCEIFLRDGGRFHHFINGKCSCNDCW* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2058 949 Gene3D Tetratricopeptide repeat domain 302 419 IPR011990 GO:0005515
Dod07g2058 949 Gene3D Tetratricopeptide repeat domain 145 287 IPR011990 GO:0005515
Dod07g2058 949 Gene3D Tetratricopeptide repeat domain 615 924 IPR011990 GO:0005515
Dod07g2058 949 Gene3D Tetratricopeptide repeat domain 426 601 IPR011990 GO:0005515
Dod07g2058 949 Pfam PPR repeat family 540 588 IPR002885 -
Dod07g2058 949 Pfam PPR repeat family 335 380 IPR002885 -
Dod07g2058 949 Pfam PPR repeat family 644 688 IPR002885 -
Dod07g2058 949 Pfam PPR repeat family 470 517 IPR002885 -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 677 707 IPR002885 -
Dod07g2058 949 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 152 233 - -
Dod07g2058 949 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 231 937 - -
Dod07g2058 949 Pfam E motif 759 821 IPR046848 -
Dod07g2058 949 Pfam DYW family of nucleic acid deaminases 857 949 IPR032867 GO:0008270
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 471 505 IPR002885 -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 506 540 IPR002885 -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 370 404 IPR002885 -
Dod07g2058 949 Pfam PPR repeat 616 641 IPR002885 -
Dod07g2058 949 Pfam PPR repeat 716 740 IPR002885 -
Dod07g2058 949 Pfam PPR repeat 237 262 IPR002885 -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 335 369 IPR002885 -
Dod07g2058 949 PANTHER OS05G0586900 PROTEIN 231 937 - -
Dod07g2058 949 PANTHER OS05G0586900 PROTEIN 152 233 - -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 642 676 IPR002885 -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 304 334 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 338 371 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 508 542 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 543 576 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 474 506 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 307 336 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 645 678 IPR002885 -
Dod07g2058 949 TIGRFAM PPR: pentatricopeptide repeat domain 679 713 IPR002885 -
Dod07g2058 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 541 575 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2058 Dod-Chr7 51468587 51471580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2058 147 949 Glycoside Hydrolase AT3G49170 30.787 1.29e-131 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2058 - - gmx:100796795 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2058 07 51468587 51471580 Dod07g2058 07 51468587 51471580 ECH