Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2055 ATGGCAAGGGTGAAGCATGTCCCTACTCCTAAAGAACGCAGTACAAGAAGAAGAAAGGGAGCTTCATCCTCATCTACACCTGCACCTTCGCAATCGCAATCGCCTGCTCGAAGCAGGAGGAGGAGAGATGGAGGAGAAGAACCTGAACCACAGTCAGCACCTGCCGCTGGGACTCAGGGTAGGAAGAAAAGGCGCACTAAGCAAGGAACAGTGGCTCTTCGTGAGATTCGCCACTTTCAGAAGACTCTCAAGCTACTTATCCCAGCTGCCCCCTTCGTCAGATGTGTCAGACAGATTACAAACCAATTTTCTACGGAGGTATCTCGCTGGACAGCTGAAGCTATGGTAGCACTTCAGGAAGCAGCCGAGGATTATCTGGTTCGTTTGTTTGAAGATGGAATGCTCTGTGCAATTCATGCAAAGCGTGTGACTCTTAGTAAGTTGACAAATTCTCTGTGCATTCCTCTGATTTTCTTTTCATCCATCATATCAGTTATCTTTTATTTTCAAATTATATGTTAA 522 0.4617 MARVKHVPTPKERSTRRRKGASSSSTPAPSQSQSPARSRRRRDGGEEPEPQSAPAAGTQGRKKRRTKQGTVALREIRHFQKTLKLLIPAAPFVRCVRQITNQFSTEVSRWTAEAMVALQEAAEDYLVRLFEDGMLCAIHAKRVTLSKLTNSLCIPLIFFSSIISVIFYFQIIC* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2055 173 MobiDBLite consensus disorder prediction 20 35 - -
Dod07g2055 173 MobiDBLite consensus disorder prediction 1 19 - -
Dod07g2055 173 Pfam Core histone H2A/H2B/H3/H4 35 147 IPR007125 GO:0003677
Dod07g2055 173 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 13 148 - -
Dod07g2055 173 MobiDBLite consensus disorder prediction 1 69 - -
Dod07g2055 173 PANTHER HISTONE H3 13 148 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod07g2055 173 PRINTS Histone H3 signature 34 48 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod07g2055 173 PRINTS Histone H3 signature 139 160 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod07g2055 173 PRINTS Histone H3 signature 105 123 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod07g2055 173 PRINTS Histone H3 signature 123 139 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod07g2055 173 Gene3D Histone, subunit A 2 154 IPR009072 GO:0046982
Dod07g2055 173 SUPERFAMILY Histone-fold 33 146 IPR009072 GO:0046982
Dod07g2055 173 SMART h35 58 157 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2055 Dod-Chr7 51448297 51454182 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2055 K11253 - gmx:100811872 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2055 07 51448297 51454182 Dod07g2055 07 51448297 51454182 ECH