Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2046 ATGGCCTCGGAGGATGTGAAGAGCGGTGAATCGGCGGTGACGAAGATTGTGAACCTGGCGGAGGAGGCCAAGCTTGCCAGAGAAGGCGTCGTCGTCGTGAAAGCTCCTCCAACCTACGCTCTCGCCAGCATCTGCAAGTCACTCGTCGCCGGCGGCGTCGCTGGAGGAGTATCACGAACAGCAGTTGCTCCACTAGAAAGGTTGAAAATTTTGCTACAGGTCCAAAATCCTCATAACATTAAATACAATGGAACCATCCAAGGCTTAAAATACATATGGAGGACTGAAGGTTTTCGTGGACTGTTCAAGGGGAACGGTACTAATTGTGCTCGAATTGTCCCTAATTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAGGGTATATTGTATTTCTATCGGCAGCAGGCTGGAAATGAGGATGCTCAGCTGACTCCTCTTTTACGTCTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACTTACCCAATGGATATGGTTCGTGGCAGGATAACTGTTCAGACCGAGAAATCCCCTTATCAGTATAGAGGAATGTTCCATGCTCTGTCTACTGTGCTAAGGGAAGAAGGTCCACGTGCTTTATATAAGGGCTGGCTTCCTTCAGTAATTGGAGTTATTCCCTATGTGGGTCTCAACTTTGCTGTATATGAGTCTTTAAAGGATTGGTTAGTCAAATCCAAACCACTTGGTCTAGTTCAAGATTCTGAGTTGAGTGTGACAACACGGTTGGCTTGTGGTGCTGTTGCTGGAACCATTGGACAAACTGTTGCTTACCCTCTTGATGTCATTCGTCGAAGAATGCAGATGGTGGGTTGGAACCATGCTGCTGCTGTTGTAGCTGGTGATGGGAGAGGCAAAGTCCCCCTTGAATACTCTGGAATGATTGATGCATTTAGGAAAACTGTTCGGCATGAGGGATTTGGTGCATTATACAAGGGTCTGGTGCCCAATTCTGTTAAGGTGGTCCCATCCATAGCGATTGCGTTCGTAACATATGAGGTGGTGAAGGATATTTTAGGAGTGGAGATCAGAATATCAGATTGA 1077 0.468 MASEDVKSGESAVTKIVNLAEEAKLAREGVVVVKAPPTYALASICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYFYRQQAGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLVKSKPLGLVQDSELSVTTRLACGAVAGTIGQTVAYPLDVIRRRMQMVGWNHAAAVVAGDGRGKVPLEYSGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEIRISD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2046 358 PRINTS Mitochondrial carrier protein signature 160 178 IPR002067 GO:0055085
Dod07g2046 358 PRINTS Mitochondrial carrier protein signature 104 124 IPR002067 GO:0055085
Dod07g2046 358 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Dod07g2046 358 PRINTS Mitochondrial carrier protein signature 60 74 IPR002067 GO:0055085
Dod07g2046 358 PRINTS Mitochondrial carrier protein signature 206 224 IPR002067 GO:0055085
Dod07g2046 358 PRINTS Mitochondrial carrier protein signature 47 60 IPR002067 GO:0055085
Dod07g2046 358 SUPERFAMILY Mitochondrial carrier 43 345 IPR023395 -
Dod07g2046 358 Pfam Mitochondrial carrier protein 43 129 IPR018108 -
Dod07g2046 358 Pfam Mitochondrial carrier protein 247 350 IPR018108 -
Dod07g2046 358 Pfam Mitochondrial carrier protein 145 237 IPR018108 -
Dod07g2046 358 PANTHER BNAA09G39370D PROTEIN 1 353 - -
Dod07g2046 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 349 IPR018108 -
Dod07g2046 358 PANTHER SOLUTE CARRIER FAMILY 25 1 353 - -
Dod07g2046 358 Gene3D Mitochondrial carrier domain 40 352 IPR023395 -
Dod07g2046 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 129 IPR018108 -
Dod07g2046 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 145 233 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2046 Dod-Chr7 51284387 51288794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2046 48 353 EF-hand Containing Proteins AT5G51050 39.088 4.44e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2046 K14684 - gmx:100814032 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3604 01 77365007 77370055 Dod07g2046 07 51284387 51288794 PCT