Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2028 ATGACAACAGCAACAACAACAACATTGGATAATGTTGTGAAACCATTTTTGTGTTCAACACCACTGTTTCCAAACATGTCAGAGAAGAAGAAGAAGAAGAACAACAACAACAACAAGAACGAGGTCAACACAACAACTACAGCTACAAAGGCCAGTATTGGGGTCAGAAAATGCAAAAGGCAAAACCCTTTGGTAGAAAAAGTGGAAGTTGAAGACATAGAGAATGCAGCAGCATTCTCTTCCTCCTCATTCTCATTCACCAAAGATGACACTCACAAACTGAGGGTGGCCTTGTTGGATTGGTATGACCAGAACCATAGGGACCTTCCATGGAGAACCTTCAACCATGATTCCAATGATGATGAAGAAGAAGAAGAAGAAGAAGTGGAAAGGAGAGCTTATGGTGTGTGGGTTTCTGAAGTGATGCTGCAGCAAACAAGGGTTCAGACTGTTATTGCTTATTACAACCGTTGGATGCTAAAATGGCCCACTATTTACCATTTAGCACAGGCTTCTCTTGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTATCGAAGAGCTCGTTTTCTTTTAGAGGGTGCAAAGAAAGTAGTTGCAGAAGGAGGAAGAATTCCTAAAACTGCTTCTATGCTGCGAAAGATTCCTGGAATTGGAGAATATACAGCTGGGGCTATTGCCTCAATAGCATTCAAAGAGGTGGTACCTGTTGTTGATGGAAATGTGGTAAGGGTGATTGCTAGACTAAGGGCTGTTTCTGCAAATCCAAAAGATTCAGCAACCGTTAAGAGATTTTGGAAATCAGCAGCTCAGTTGGTTGATCCTCTTCGTCCAGGGGACTTCAATCAAGCTCTCATGGAACTTGGGGCAACTGTTTGCACCCCTTTGAACCCAAGCTGCTCCTCATGTCCAGCATCAGAATTTTGTCGAGCATTATCAATTTCTAAACATGACACTTCTGTAGCAGTTACAGATTATCCTGTTAAAGTCGCAAAGGTTAAACAAAGATGTGATTTTTCGGCTGTATGTGTTGTTGAATTACTTGGAGCCAACGCAAGGTTAGACGAAAACCAGTCTACGAGCAAGTTTGTTCTTGTAAAAAGGCCTGATGAAGGATTGCTGGCCGGTCTCTGGGAGTTCCCATCTGTCTCTTTGGATGGTGAAACTGCTTCATTGGCTAGAAGGGAAGCAATGAATCACTTTCTGAAAAAAGTTCTCCAAATTGACACCAGAAAGAGTTGCAACATAGTTTTGAGGGAGGATGTTGGGGAATTTGTTCACATTTTCAGTCACATTCGCCTCAAGTTGTATGTCGAATTGCTAGTGTTGCAACTGAAAGGGAACATTGAAAATTTGTTCCAAAGTCAGGGAAATGAAACTACAACTTGGAAATGTGTTGACAGCAATTTGCTTACAAGTATGGGACTGACAACTAGTGTAAGAAAGGTATACAGTATGGTTCAGAAATTTAAGCAGAAAAGTTTTCCTTCTGATGTGCCTGCCAAAAAGAGAAACAGAACGACCAAGAGAAACTTAGCCTAG 1545 0.4175 MTTATTTTLDNVVKPFLCSTPLFPNMSEKKKKKNNNNNKNEVNTTTTATKASIGVRKCKRQNPLVEKVEVEDIENAAAFSSSSFSFTKDDTHKLRVALLDWYDQNHRDLPWRTFNHDSNDDEEEEEEEVERRAYGVWVSEVMLQQTRVQTVIAYYNRWMLKWPTIYHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKVVAEGGRIPKTASMLRKIPGIGEYTAGAIASIAFKEVVPVVDGNVVRVIARLRAVSANPKDSATVKRFWKSAAQLVDPLRPGDFNQALMELGATVCTPLNPSCSSCPASEFCRALSISKHDTSVAVTDYPVKVAKVKQRCDFSAVCVVELLGANARLDENQSTSKFVLVKRPDEGLLAGLWEFPSVSLDGETASLARREAMNHFLKKVLQIDTRKSCNIVLREDVGEFVHIFSHIRLKLYVELLVLQLKGNIENLFQSQGNETTTWKCVDSNLLTSMGLTTSVRKVYSMVQKFKQKSFPSDVPAKKRNRTTKRNLA* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2028 514 PANTHER ADENINE DNA GLYCOSYLASE 34 506 IPR044298 GO:0006284|GO:0016798
Dod07g2028 514 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 333 495 - -
Dod07g2028 514 Pfam NUDIX domain 362 485 IPR029119 -
Dod07g2028 514 CDD ENDO3c 134 290 IPR003265 GO:0006284
Dod07g2028 514 SMART ccc3 293 313 IPR003651 GO:0051539
Dod07g2028 514 Pfam Helix-hairpin-helix motif 203 230 IPR000445 GO:0003677
Dod07g2028 514 SMART endo3end 142 292 IPR003265 GO:0006284
Dod07g2028 514 CDD DNA_Glycosylase_C 363 485 IPR029119 -
Dod07g2028 514 MobiDBLite consensus disorder prediction 25 48 - -
Dod07g2028 514 ProSitePatterns Endonuclease III family signature. 204 233 IPR004036 -
Dod07g2028 514 Gene3D Hypothetical protein; domain 2 108 237 - -
Dod07g2028 514 SUPERFAMILY Nudix 328 488 IPR015797 -
Dod07g2028 514 Pfam HhH-GPD superfamily base excision DNA repair protein 138 269 IPR003265 GO:0006284
Dod07g2028 514 Gene3D - 93 312 IPR023170 -
Dod07g2028 514 SUPERFAMILY DNA-glycosylase 94 313 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2028 K03575 - gmx:100818278 693.73