Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2016 ATGAAGGCCTCGAATTCGGGTATATTTGACCCGGTTATGGTCATGGAACGTGAATGGACCTGCGGACCCGGGTCACCCTCCGACAACGATTTCGGGTTCGCTTTCAATGACAGCAACTTCTCCGACCGCCTCCTCCGGATCGAGATCGCCGGCGACCCGAACGATCCCCGACCCGACTCCGACGCCGTCACCGTCGCCGACTGGGCTCGTCACCGCAAGAGGCGCCGCGAGGATATCAAGAAGGAAAACGTTGCGGATCTTGCTTTGTTGCCAGAGGAACAAGTTTTGAACGAGAATCAACCTGATATGGATGATTTCGTGACCTGTGAAAATCAAGACGATGAAGAGACTGTTGCAATGGTTGAAGAATGCCCTTCAGGTGATGAAGCTGCGAATGGTGCTGATTCAAATTGGAGCATGGATTGCTCTACAGTTGTGAGAGTTAAAATGCTACATATCAGTTCTCCTATCTTGGCTGCTAAAAGTCCTTACTTCTATTCGCTTTTCTCAAATGGGATGAGGGAGTCAGAGCAGAGAGATATCACCCTGAGAATTAATGCCTCTGAAGAAGCTGCTCTCATGCAGTTACTGAAATTTATGTACTGTAATACTTTGAGCAGTATGTCAGCACCTGCTGTGCTGGATGTGTTGATGGCTGCTGATAAATTTCAAGTTACTTCATGCATGAGATACTGTAGCCAGTTATTGAGGGACATGCCCATGACACCTGCCTCTGCATTGCTTTATCTGGAGCTTCCATTTACCGTCATAAAGGCTGAATCAGTCCAACCATTAGCTGATGCAGCAAAACAGTTTCTTGCTGTTCGATACAAGGACATAACCAAGTTCCAACCAGAGGTTATGGCATTGCCATTAGCTGGAGTAGAGGCGATATTGGCTAGTGATGATCTCCAGGTTGCATCAGAAGATGCTATATATGACTTAGTGTTGAAGTGGGCTAGAACTCAGTACAGCAAACTGGAAGAAAGGCGAGAAGTCCTGGGTGCACGGCTCGCACGACTAATTCGCTTTCCTTACATGACCTGCCGAAAACTGAAGAAGGTCTTGTGCTGTAATGACTTTGATCATGAGGTTGCATCCAAATTTGTACTTGAGGCCTTACTTTTCAAGTCTGAGGCTCCACACCGGCAACGGTCAATGGCGGCTGAAGAGTCTGCCTCATTGTACCACCGTTTTGTGGAGAGGGCATACAAGTATCGCCCCATTAAGGTGGTAGAATTTGAGCATCCCCGGCCGCAGTGTATTGTGTACTTGGATCTCAAGCGGGAGGAATGTGTCAATTTGTTTCCATCTGGCCGGGTTTATTCTCAAGCATTCCATTTGGGTGGACAGGGGTTTTTTCTATCAGCTCATTGCAACATGGATCAACAGGGCAATTTCCATTGTTTTGGGCTGTTCTTGGGAATGCAGGAAAAGGGCTCAGTAAGCCTCACCGTCGACTATGAATTTTCCGCGAGGTCAAGTCCAACTGAGGAATTTGTTAGCAAGTACAAAGGCAACTACACATTCACTGGAGGGAAGGCCGTTGGGTATAGAAACTTGTTTGCCATTCAATGGCCTTCGTTCATATCCGAGGATTGTGCTTACTTCATTAACGGTGTCCTTTACCTTAGAGCCGAGCTCTGCATCAGACATTGA 1659 0.4744 MKASNSGIFDPVMVMEREWTCGPGSPSDNDFGFAFNDSNFSDRLLRIEIAGDPNDPRPDSDAVTVADWARHRKRRREDIKKENVADLALLPEEQVLNENQPDMDDFVTCENQDDEETVAMVEECPSGDEAANGADSNWSMDCSTVVRVKMLHISSPILAAKSPYFYSLFSNGMRESEQRDITLRINASEEAALMQLLKFMYCNTLSSMSAPAVLDVLMAADKFQVTSCMRYCSQLLRDMPMTPASALLYLELPFTVIKAESVQPLADAAKQFLAVRYKDITKFQPEVMALPLAGVEAILASDDLQVASEDAIYDLVLKWARTQYSKLEERREVLGARLARLIRFPYMTCRKLKKVLCCNDFDHEVASKFVLEALLFKSEAPHRQRSMAAEESASLYHRFVERAYKYRPIKVVEFEHPRPQCIVYLDLKREECVNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQGNFHCFGLFLGMQEKGSVSLTVDYEFSARSSPTEEFVSKYKGNYTFTGGKAVGYRNLFAIQWPSFISEDCAYFINGVLYLRAELCIRH* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2016 552 SMART BACK_2 255 357 IPR011705 -
Dod07g2016 552 CDD BTB_POZ_ZBTB_KLHL-like 141 223 - -
Dod07g2016 552 SMART BTB_4 140 240 IPR000210 GO:0005515
Dod07g2016 552 Gene3D Potassium Channel Kv1.1; Chain A 110 272 IPR011333 -
Dod07g2016 552 ProSiteProfiles BTB domain profile. 140 209 IPR000210 GO:0005515
Dod07g2016 552 Pfam BTB And C-terminal Kelch 261 355 IPR011705 -
Dod07g2016 552 Pfam BTB/POZ domain 140 237 IPR000210 GO:0005515
Dod07g2016 552 SUPERFAMILY TRAF domain-like 439 550 - -
Dod07g2016 552 Gene3D - 273 377 - -
Dod07g2016 552 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 552 - -
Dod07g2016 552 SUPERFAMILY POZ domain 138 238 IPR011333 -
Dod07g2016 552 PANTHER OS02G0260700 PROTEIN 6 552 IPR045890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2016 Dod-Chr7 51029243 51032526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2016 - - cpap:110807101 877.47