Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1937 ATGGAACATCCAGATAATGGAAAAGAATCATCAAATAATGCAGATGAAGTAGAATTCACTACTTCTCCACTCATTGGTGGCCTTCCAGATGATATATCTCTTTTCTGCTTAGCAAGAGTTCCTAGAAAGTATCATTCTGTCCTGAAGTGTGTCTCAAAGAGGTGGAGGGACTTAGTTTGCAGTGAAGAGTGGTATCGCTATCGCCAAAAGCATAAACTTGATGAGACCTGGATCTATGCTTTGTGCAGGGACAAATTAGATCAGATTTGCTGCTATGTTTTGGATCCAACCTCATCAAGAAGATGTTGGAAGCTCATTCAAGGGCTTCCACATCGCATTTTGCAGAGAAAAGGCATGGGTTTTGAAGCTTTAGGAAATAAGCTGTTCTTATTGGGTGGCTGTGGCTGGTCTGTAGATGCTACTGATGAGGTCTGTTCATATAATGCTTCCACGAACTCTTGGATTGAAGCTGCTTCCTTGTCAACTGCTAGGTGCTACTTTGCTTGTGAAGTTTTGGATGAAAAGCTATATGCTATTGGAGGAATAGGCTCAAATTCAAGTGATCCTCATTCTTGGGATACTTTTGACCCTCGAACAAATGGTTGGACATCTCATAGAGACCCTAATATTGTTCCTGAAACTGAAGATTCAGTAGTTATGGATGGGAAGATATACATTCGATGCGGCAAGTCGCCTGTAACTCCGCACGTGTACGCTGTTGTATACGAACCATCAAGTGGCACATGGCAGCATGCGGATGCTGACATGGTTTCAGGGTGGAGGGGTCCTGCAGTTGTTGTTGATGGGGTCCTCTATGTTTTGGATCAGAGTTCAGGAACTAGGCTAATAATGTGGCATAAGGACAAACGGGAGTGGATGCCTGTCGGAAAGCTTTCACCATTGTGTACAAGACCACCCTGCCAGCTTGTTGCAGTTGGTAAGAGCATTTTTATTGTTGGCAAAGGGCTTAGCACTGTGGTGGTTGATGTTGGTGATTCGGGGAATGTGGGAAGGGTGATGATGAGTTCTTCCATACGCAGATTGTTTTCTGATTACCAGTCTGATTACCATGTAATTAGCTGTAAATGCTTGGCAATATGA 1101 0.4351 MEHPDNGKESSNNADEVEFTTSPLIGGLPDDISLFCLARVPRKYHSVLKCVSKRWRDLVCSEEWYRYRQKHKLDETWIYALCRDKLDQICCYVLDPTSSRRCWKLIQGLPHRILQRKGMGFEALGNKLFLLGGCGWSVDATDEVCSYNASTNSWIEAASLSTARCYFACEVLDEKLYAIGGIGSNSSDPHSWDTFDPRTNGWTSHRDPNIVPETEDSVVMDGKIYIRCGKSPVTPHVYAVVYEPSSGTWQHADADMVSGWRGPAVVVDGVLYVLDQSSGTRLIMWHKDKREWMPVGKLSPLCTRPPCQLVAVGKSIFIVGKGLSTVVVDVGDSGNVGRVMMSSSIRRLFSDYQSDYHVISCKCLAI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1937 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 336 - -
Dod07g1937 366 SMART kelc_smart 127 174 IPR006652 GO:0005515
Dod07g1937 366 SUPERFAMILY Kelch motif 88 322 IPR015915 GO:0005515
Dod07g1937 366 Pfam Kelch motif 163 203 IPR006652 GO:0005515
Dod07g1937 366 Pfam Kelch motif 116 161 IPR006652 GO:0005515
Dod07g1937 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 336 - -
Dod07g1937 366 SUPERFAMILY F-box domain 22 75 IPR036047 GO:0005515
Dod07g1937 366 Pfam F-box domain 28 62 IPR001810 GO:0005515
Dod07g1937 366 Gene3D - 66 339 IPR015915 GO:0005515
Dod07g1937 366 SMART fbox_2 28 67 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1937 Dod-Chr7 49871034 49873937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1937 28 303 Miscellaneous Gene Families AT4G33900 26.087 1.88e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1937 - - qsu:112035561 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1937 07 49871034 49873937 Dod07g1937 07 49871034 49873937 ECH