LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod07g1904	ATGGCAACTTCGTTCTCTGTTATCTCTCGGCCATACTCTGAATCGCAATTTGTTTTGTACAACTTAGCTAACCGGAGAACCGGAAGATTCGGTTGTCGAAGCGGTTCGGGGCGGTTCAGGTGCTCGGCGGGTCAGACCGGTTTCTTCACGAAATTGGGGAGGCTGATAAAGGAGAAGGCGAAGAGTGACGTGGACAAGATATTCAGTGGGTTCTCGAAGACGAGGAACAACCTCGCCGTCATCGACGAGCTCCTCCTCTACTGGAACCTCTCCGACACCGACCGCGTCCTCGACCAACTCGAAGAGGCTCTTTTGGTGTCTGATTTCGGGCCAAAAATCACTATTAAGATAGTGGAGAATTTGCGGGACGATATATTGTCGGGGAAGCTCAAATCAGGGAATGAGATAAAGGAAGCACTGAAGCAGAATGTCTTGGACCTGTTGACCACAAAGGGGAGTAAAACTGAACTTCAGCTTGGATTCAGGAAGCCAGCTGTAATAATGATAGTTGGTGTTAATGGTGGTGGGAAGACAACATCTCTTGGAAAGCTGGCCTATAGATTGAAGAATGAAGGGGCAAAGATACTGATGGCGGCTGGTGATACATTTCGAGCTGCTGCTAGTGATCAGCTGGAAATATGGGCTGAAAGGACTGGCTGTGAAATTGTTGTGGCTGAATCAGAGAAAGCTAAAGCATCATTAGTTCTTTCACAGGCTGTTAAAAAGGGAAAAGAACAAGGTTTCGATGTCGTCTTGTGTGATACATCTGGACGTTTACATACTAATTACAGCCTTATGGAAGAGTTGATTTCATGTAAAAAGGCAGTTAGCAAAGTTGTTGCTGGTGCACCTAATGAGATCCTGCTGGTTCTGGATGGAACTACAGGTTTGAATATGCTGCCACAAGCAAGAGAGTTCAATGATGTTGTGGGTGTGACTGGTTTAATTTTGACCAAGCTGGATGGTTCTGCTAGAGGTGGCTGTGTGGTCGGTGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTGGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGAGGCCTTTGTCAATGCCATTTTTATGTAA	1101	0.4623	MATSFSVISRPYSESQFVLYNLANRRTGRFGCRSGSGRFRCSAGQTGFFTKLGRLIKEKAKSDVDKIFSGFSKTRNNLAVIDELLLYWNLSDTDRVLDQLEEALLVSDFGPKITIKIVENLRDDILSGKLKSGNEIKEALKQNVLDLLTTKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASLVLSQAVKKGKEQGFDVVLCDTSGRLHTNYSLMEELISCKKAVSKVVAGAPNEILLVLDGTTGLNMLPQAREFNDVVGVTGLILTKLDGSARGGCVVGVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFM*	367

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod07g1904	366	CDD	FtsY	165	364	-	-
	Dod07g1904	366	ProSitePatterns	SRP54-type proteins GTP-binding domain signature.	339	352	IPR000897	GO:0005525\|GO:0006614
	Dod07g1904	366	PANTHER	BNAA04G26420D PROTEIN	28	365	-	-
	Dod07g1904	366	Gene3D	-	54	155	IPR042101	-
	Dod07g1904	366	Gene3D	-	156	366	IPR027417	-
	Dod07g1904	366	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	161	364	IPR027417	-
	Dod07g1904	366	TIGRFAM	ftsY: signal recognition particle-docking protein FtsY	93	365	IPR004390	GO:0006614
	Dod07g1904	366	Pfam	SRP54-type protein, GTPase domain	164	365	IPR000897	GO:0005525\|GO:0006614
	Dod07g1904	366	SUPERFAMILY	Domain of the SRP/SRP receptor G-proteins	64	141	IPR036225	-
	Dod07g1904	366	Pfam	SRP54-type protein, helical bundle domain	93	142	IPR013822	GO:0005525\|GO:0006614
	Dod07g1904	366	SMART	SRP54_N_2	67	148	IPR013822	GO:0005525\|GO:0006614
	Dod07g1904	366	PANTHER	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	28	365	-	-
	Dod07g1904	366	SMART	AAA_5	163	336	IPR003593	-
	Dod07g1904	366	SMART	SRP54_3	164	366	IPR000897	GO:0005525\|GO:0006614

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod07g1904	Dod-Chr7	49504003	49511200	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod07g1904	K03110		-	gmx:100791073	624.009

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod07g1904	07	49504003	49511200	Dod07g1904	07	49504003	49511200	ECH