Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1852 ATGTTAATATACACAATTAAGACCTCTGTATTGTTGCCTCCTTCTGGTCGTTGCAGCTATCATTGGATACAACGGAAGGGAAGACCTGCACCAAGGGAAGTCGCACCAATAATTGTATCTAATCATGTATCTTACATTGAGCCTATCTTCTATTTCTATGAATTATTTTCCACCATTGTGGCGTCTGAGTCTCATGACTCCATACCTTTTGTTGGCACCATTATTAGAGCAATGCAGGTTATATATGTTGACAGGTTCTCACCATCATCAAGGAAGCGGGCTGTCAAGGAAATAAAGAAAAGGGCTTCTTGCAATAGATTTCCTCGAGTACTATTATTTCCGGAGGGAACCACGACTAATGGCAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCCCTGGTTACCCAATCCAGCCTGTAATTGTTCGCTATCCTCATGTGCACTTTGATCAATCTTGGGGTAATGTTTCTTTGGCAAAGCTCATGTTCAGGATGTTCACTCAGTTCCATAACTTCTTTGAGGTAGAATATCTTCCAGTCATTTCACCCCTGCATGATAAGGAAACTGCTATCCACTTTCGCGAGAGGGCTAGCCATGCTATTGCAACTGCAATGAATGTTGTCCAAACCGGACATACATATGGAGACATAATGCTTTATATGAAAGCACAAGAAGCAAAACAGGAGAACCCCTCAAGTTATATGCTTGAAATGTCAAGGGTGGAATCATTATTTCATATCAGAAGCTTGGAAGCTGTGGACTTCCTAGATAAATTCTTGGCTATGAATCCTGATCCCAGTGGTCGTGCCCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCCTGTCCTTTATCTGAAAAGATATTTACATTCATTGACGTGGAGAAGTGTGGGACAATTACATTTAGACAGTTCTTGTATGGATCCGCGCATGTCATGAAGCAGCCAGGCTTCCATCGAACCTGTGAAGCAGCCTTTGCTGAATGTGGTGGTGCAGTAAAGGCCTACATTGTAGAAGAAGAATTGCGAGATTTCGTGCAACGTGCTATCCCCAGCTGGAATGAGGATGAGGTTCATGAGCTTTTTGTGTTATTTGATGGTGACAATGATGGAAGAATCAACAAGGATGATTTTCTTTCATGCCTTAGAAGGAACCCTCTTCTCATTGCATTTTTTACACCTCAGCATCAGCACAAGGATTTGGGTGACAATGGAGTGCTACAGATAGTGTGA 1242 0.4203 MLIYTIKTSVLLPPSGRCSYHWIQRKGRPAPREVAPIIVSNHVSYIEPIFYFYELFSTIVASESHDSIPFVGTIIRAMQVIYVDRFSPSSRKRAVKEIKKRASCNRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGNVSLAKLMFRMFTQFHNFFEVEYLPVISPLHDKETAIHFRERASHAIATAMNVVQTGHTYGDIMLYMKAQEAKQENPSSYMLEMSRVESLFHIRSLEAVDFLDKFLAMNPDPSGRAQYHDFLRVLRLKACPLSEKIFTFIDVEKCGTITFRQFLYGSAHVMKQPGFHRTCEAAFAECGGAVKAYIVEEELRDFVQRAIPSWNEDEVHELFVLFDGDNDGRINKDDFLSCLRRNPLLIAFFTPQHQHKDLGDNGVLQIV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1852 413 Pfam EF-hand domain pair 342 387 IPR002048 GO:0005509
Dod07g1852 413 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Dod07g1852 413 SMART plsc_2 36 146 IPR002123 GO:0016746
Dod07g1852 413 SUPERFAMILY EF-hand 253 396 IPR011992 -
Dod07g1852 413 SMART efh_1 360 388 IPR002048 GO:0005509
Dod07g1852 413 CDD LPLAT_LPCAT1-like 18 219 IPR045252 GO:0008374
Dod07g1852 413 ProSiteProfiles EF-hand calcium-binding domain profile. 356 391 IPR002048 GO:0005509
Dod07g1852 413 Gene3D - 238 391 - -
Dod07g1852 413 CDD EFh 339 382 IPR002048 GO:0005509
Dod07g1852 413 Pfam Acyltransferase 34 140 IPR002123 GO:0016746
Dod07g1852 413 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 19 400 - -
Dod07g1852 413 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 19 400 - -
Dod07g1852 413 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 36 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1852 Dod-Chr7 48229850 48277796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1852 23 221 Acyl Lipid Metabolism Gene Families AT1G80950 32.850 1.19e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1852 K13510 - gmx:100818109 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1852 07 48229850 48277796 Dod07g1852 07 48229850 48277796 ECH