Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1847 ATGTCTCAACTAGTGCTTCTTTCACCTCAAAAGCCAAAAGAAAATGATAACGAAGGAGAAAAAATTATCTTTGATCCATCTTTTATGTCATATCAACCTAACATACCCTCAAAGTTTATATGGCCTGATCATGAGAAGCCATGTCTAATGTTACCAGAACTCCAAGTTCCACAAATTGACTTGAAGGCCTTTTTTTCAGGAGACCCAGAAGCCATTTCAATTGCTTGCTCAAAAAGAAGCAAAGAGCTCACTGAAAGATTGGAGATTATTGTGGATCAATCTTGCAAAACTGTGGAAGAATATTTTGTTAGTGTTATGGGGGAAGATTTCAAACAAGTTGGGATTTTCTACCAAGACTATTGTGAAGTTATGAGCAATCTTTCCCTTGAGATAATGGAGCTGTTGGGAGTTAGCTTAGGAGTTGGACGCCAATATTTCAGAGATTTTTATCAAGAAAATGACTCTGTAATGAGATTGAATTACTATCCACCTTGCCAAGAGCCTGATTTGACTTTAGGAACTGGGCCTCACTGTGATCCAACATCCCTAACTATACTTCATGAAGATCAAGTTGGGGGTCTACAAATATTTGTGGATGAACAATGGTACTCTGTTCATCCAAAAGATGATGCCTTTGTGGTCAACATCGGTGACACATTTATGGTTCTATCTAATGGAATTTACAAGAGTTGCATGCACAGGGCTGTTGTGAATAGAAAAACTGTGAGAAAATCATTGGCTTTCTTTTTGTGTCCAAATGCAAACAAAGTGGTCACTCCTCCAAAAGACCTTGTCACTAAGGAGAATCCAAGAAAATATCCAAACTTTACTTGGCCAGCATTTCTTGAATTTACACAAAGGTATTACAGGTCTGATAGAAGAACCCTGGATGCTTTCTCAAGGTGGCTGCCACAGCCAACGAATTAA 927 0.384 MSQLVLLSPQKPKENDNEGEKIIFDPSFMSYQPNIPSKFIWPDHEKPCLMLPELQVPQIDLKAFFSGDPEAISIACSKRSKELTERLEIIVDQSCKTVEEYFVSVMGEDFKQVGIFYQDYCEVMSNLSLEIMELLGVSLGVGRQYFRDFYQENDSVMRLNYYPPCQEPDLTLGTGPHCDPTSLTILHEDQVGGLQIFVDEQWYSVHPKDDAFVVNIGDTFMVLSNGIYKSCMHRAVVNRKTVRKSLAFFLCPNANKVVTPPKDLVTKENPRKYPNFTWPAFLEFTQRYYRSDRRTLDAFSRWLPQPTN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1847 308 Pfam 2OG-Fe(II) oxygenase superfamily 154 252 IPR044861 -
Dod07g1847 308 Gene3D - 77 284 IPR027443 -
Dod07g1847 308 PANTHER GIBBERELLIN 20-OXIDASE 17 78 - -
Dod07g1847 308 PANTHER GIBBERELLIN 20-OXIDASE 92 304 - -
Dod07g1847 308 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 78 - -
Dod07g1847 308 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 92 304 - -
Dod07g1847 308 SUPERFAMILY Clavaminate synthase-like 28 292 - -
Dod07g1847 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 152 252 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1847 Dod-Chr7 48072218 48074245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1847 119 301 Glycosyltransferase AT5G59530 34.409 3.11e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1847 K05282 - gmx:100775693 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1847 07 48072218 48074245 Dod07g1847 07 48072218 48074245 ECH