Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1840 ATGTCAACGGCTGTGACGGAACCGCCACGAATCCTCGTACTGGGTCCTCCATTGGTCTTCGACCTCCTCGAATCACAGCACTCTCGCAGGTACCGTTTCCTGAAAGCCTTCTCCTCTCAGCTCCCGCTCCTCCGATTCCTGCACACCCAGCACGCCCACCCTTCCTCCATCCCAGTCATCCTCTGCAACCCATTCCAGCCGGTCACCGCTCACGTCATCCGCTCGCTCCCCTCTCTCCGCCTCGTCCTCACCACCAGCGCCGGCACCGACCACATCGACGTCTCCGAGTGCCGCCGCCGCGGCATCGAGGTTGTCCCCCTCGCAGCAGAGTTCGCTGCCGATGTCGCCGACATGGCCGTCGCGTTGTTGATCGACGTGATGTGCAAGATCTCTGCTGCTGATCGATATGTTAGGAAAAGTAGTCCATCTAAGCCATGGAGTCTCCCTCTAGGATCAAAGCTGGGAAGCAAGCGAGTTGGGATCATTGGATTGGGTAGAATTGGTGAGGAAGTTGCTAAGAGGCTAGAGGCCTTTGATTGCAGAATTATGTACCATTCAAGGAACAAGAAGCCATCTGTCTCATACACTTTCTATTCTAATGTTGTTGAGCTTGCCTCTTACAGTGATGTTCTTGTGCTGTGTTGTCCATTAAATGAGCAAACAATGCACACAATCAACAAGGAGGTAATGTTAGCATTGGGGAAAGATGGAATTATTGTTAATGTTGGACGAGGAGCTCTAATTGATGAAAAGGAATTGGTGCAGTGTTTGGTAAAAGGGGAGATAAAAGGTGCTGGCTTGGATGTGTTTGAGAATGAGCCCAATGTTCCCAAAGAGCTCATTCCATTGGATAATGTTGTCCTATCACCTCATGCTGCTTCAGTGACTTCAGATAATTTCATATGCACATGTGAACTTGTGGCCAAGAGGCTAGATGCCTTCTTTTCAAGTAAACCGCTAACTACTCCACTCACATGTAACTAA 984 0.502 MSTAVTEPPRILVLGPPLVFDLLESQHSRRYRFLKAFSSQLPLLRFLHTQHAHPSSIPVILCNPFQPVTAHVIRSLPSLRLVLTTSAGTDHIDVSECRRRGIEVVPLAAEFAADVADMAVALLIDVMCKISAADRYVRKSSPSKPWSLPLGSKLGSKRVGIIGLGRIGEEVAKRLEAFDCRIMYHSRNKKPSVSYTFYSNVVELASYSDVLVLCCPLNEQTMHTINKEVMLALGKDGIIVNVGRGALIDEKELVQCLVKGEIKGAGLDVFENEPNVPKELIPLDNVVLSPHAASVTSDNFICTCELVAKRLDAFFSSKPLTTPLTCN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1840 327 CDD HPPR 9 316 - -
Dod07g1840 327 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 293 IPR006140 GO:0051287
Dod07g1840 327 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 58 316 IPR006139 GO:0016616|GO:0051287
Dod07g1840 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 294 IPR036291 -
Dod07g1840 327 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 52 140 - -
Dod07g1840 327 Gene3D - 51 319 - -
Dod07g1840 327 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 7 323 - -
Dod07g1840 327 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 7 323 - -
Dod07g1840 327 Gene3D - 112 296 - -
Dod07g1840 327 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 159 186 IPR029752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1840 Dod-Chr7 47872618 47874679 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1840 - K15919 lang:109340199 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1840 07 47872618 47874679 Dod07g1840 07 47872618 47874679 ECH