Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1838 ATGAACGGCGGTGGAGGCGACCCCCCACAGCCGCCGCCACCTCCCTCCAACGGCGGCGAGTATCTCCTCTCCCTCATCCAACGCCCACCCCACCACCCCCATCACCCTCCTCCACCGCAGCAACAACAACAACAACAACAATCTCCGGCACTCGATCCCGCCGTCGCCGTAATTGGCCCCACAATCCCGATCTTACCCCCGTGGCCATCCAACGGTCACGACCATCCCATCCCCCTTCATCACCATCATCACCATCAGCAAAACCACCTTCCCCCTTCTGCTTGGCCCCACTCTCTCTCTGCTCCTTCCCCTTTCCCTCCAAACCTCTTCGGTTTACCCCAGAACCCTTTCCCCACTCCTCGTTTACCCGGAACCCTAGCCCCAGTTCCATCCTCCAACATCGGAATAGACGATCTCCGAAAATTAGGGTTTCCAATTGAAGCCACCACCAACACCAACAGCACCAACAGTACCAACACCAATAATAACATTAGGGTTGATGCTTTCGTTCACCAGCAGAAGCAGCAGGAGCTGAAGCTAAAGTTTGGGTCTTTCCCCAATGACGCTTTTGCCCCTGGGGTTCCACTCAATGGGGATTTGTCTCTGGATTCCTTGCTCAACTTGAAGCTCAACAATGGGAGCTTGAAATCGGATCCCAATTTCCCGGAATCAGCTGGGAATGCTAATGTTGCTATGCAGCATGGTGTGAATTATGATGTTGTTGAACATGGTAGGGGAGGGGTTGGGAGAGGGAGCAACAATAGTTTTCATGGTGTTGGGAATTTTAGGTCTGAGACTAGTAAGGCGAATCCACCAGGGTTTGGGAACAAGCCTAGGGGGAAGGGTTATTGGACCTCTGGGGGTAGAAGGAAGGGTTCGGAGGTTGATGAGGATAGAGTGGTGATGGTTGATTCTGGTGAATTGGGTGGTAGGAATGAGGGTGCGCATACCAGGAAGGAAAATTTAAGGGTGATGTCTGGTGGAAGGAGTGGTGGCAGAGGAAAATCGGGGCGCGAAATGGGTCTTCCTGAACAGCTTGATTACCCCGGGCCACCTGCCGGGAGTAACCTCCATTCGGTCTCTGGTGTCGATGTTGAAGAGTCCAGATCGAATCTTCAGAGTGTGGTTGTTGATGGTGATGGTGATGAGGATGTTGACGCCCTTAGGGAGCAGTTAAGTGATTCCTTGTTGGTTGAGGACGAGTCTGAAGAGAAGAGCAACTCAAGGCAGCGGCGCGGTGCGCGGGAGAAGGATGCCAGATCATCGGATTCAAGAGGACAACAGTTACTAAGCCAGCGGGCGAGAATGTATAAAAGGCAGATGATATGTCGAAGGGACATTGATAATCTCAATGTTCCTTTCCTTGCAATATACGAGTCTCTAATACCTCCTGAAGAAGAAAAGGTCAAGCAGAAGCAGTTATTAGCGTTATTGGAGAAATTAGTTAGCAAGGAGTGGCCAAAAGCACGGCTTTATCTCTATGGATCATGTGCTAATTCATTTGGAGTTTCTAAAAGTGACATTGATGTTTGCCTTGCTATTGATGAAGCAGACATGGACAAATCTCAGATTCTAATGAAATTGGCGGATATTTTGCAATCAGATAACCTGCAGAATGTGCAGGCTTTGACACGGGCAAGAGTTCCTATTGTAAAGCTCATGGATCCTGTGACAGGAATTTCTTGTGACATATGCATCAACAATCTTCTGGCTGTTGTAAATACAAAGCTTCTACGGGATTATGCACACATAGATGCTAGATTACGACAGTTAGCATTTATTATCAAACATTGGGCAAAGTCAAGAGGAGTCAATGAAACTTACCATGGGACATTATCTAGCTATGCGTATGTTTTGATGTGCATTCACTTTTTGCAACAGCGAAGGCCTGCTATACTTCCATGCTTACAGGAAATGGAGACAACATACTCTGTGACAGTGGACGATATTAACTGTGCTTACTTCGACCAAGTTGAGCAACTATGTGATTTTGGACGCCGCAACAGGGAAACTATTGCTCAACTTGTGTGGGGATTTTTCTATTATTGGGCATATTGTCATGATTATGCCAATGCTGTTATATCTGTACGTATGGGAACCATAATCAGTAAGCGAGAGAAGGACTGGACAAGGAGGATTGGTAATGATCGCCATTTGATATGCATAGAGGATCCTTTTGAAATGTCTCATGATCTGGGTCGAGTGGTGGATAAACATAGCATCAAAGTTCTAAGGGAAGAGTTTGAACGTGCTGCTGATATTATGCAGTATGATCCAAATCCATGTGTTAAACTTTTTGAGCCCTATGTCCCTAGTTGA 2319 0.4748 MNGGGGDPPQPPPPPSNGGEYLLSLIQRPPHHPHHPPPPQQQQQQQQSPALDPAVAVIGPTIPILPPWPSNGHDHPIPLHHHHHHQQNHLPPSAWPHSLSAPSPFPPNLFGLPQNPFPTPRLPGTLAPVPSSNIGIDDLRKLGFPIEATTNTNSTNSTNTNNNIRVDAFVHQQKQQELKLKFGSFPNDAFAPGVPLNGDLSLDSLLNLKLNNGSLKSDPNFPESAGNANVAMQHGVNYDVVEHGRGGVGRGSNNSFHGVGNFRSETSKANPPGFGNKPRGKGYWTSGGRRKGSEVDEDRVVMVDSGELGGRNEGAHTRKENLRVMSGGRSGGRGKSGREMGLPEQLDYPGPPAGSNLHSVSGVDVEESRSNLQSVVVDGDGDEDVDALREQLSDSLLVEDESEEKSNSRQRRGAREKDARSSDSRGQQLLSQRARMYKRQMICRRDIDNLNVPFLAIYESLIPPEEEKVKQKQLLALLEKLVSKEWPKARLYLYGSCANSFGVSKSDIDVCLAIDEADMDKSQILMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAHIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQQRRPAILPCLQEMETTYSVTVDDINCAYFDQVEQLCDFGRRNRETIAQLVWGFFYYWAYCHDYANAVISVRMGTIISKREKDWTRRIGNDRHLICIEDPFEMSHDLGRVVDKHSIKVLREEFERAADIMQYDPNPCVKLFEPYVPS* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1838 772 MobiDBLite consensus disorder prediction 290 304 - -
Dod07g1838 772 MobiDBLite consensus disorder prediction 393 423 - -
Dod07g1838 772 PANTHER POLY A POLYMERASE CID PAP -RELATED 78 771 - -
Dod07g1838 772 Pfam Cid1 family poly A polymerase 672 730 IPR002058 -
Dod07g1838 772 SUPERFAMILY Nucleotidyltransferase 447 583 IPR043519 -
Dod07g1838 772 Pfam TUTase nucleotidyltransferase domain 466 564 IPR045100 GO:0016779
Dod07g1838 772 MobiDBLite consensus disorder prediction 1 18 - -
Dod07g1838 772 MobiDBLite consensus disorder prediction 1 95 - -
Dod07g1838 772 CDD NT_PAP_TUTase 472 582 - -
Dod07g1838 772 MobiDBLite consensus disorder prediction 393 429 - -
Dod07g1838 772 MobiDBLite consensus disorder prediction 263 370 - -
Dod07g1838 772 Gene3D Beta Polymerase, domain 2 471 584 IPR043519 -
Dod07g1838 772 SUPERFAMILY PAP/OAS1 substrate-binding domain 587 756 - -
Dod07g1838 772 Gene3D - 585 753 - -
Dod07g1838 772 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 78 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1838 Dod-Chr7 47718723 47729868 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1838 - - adu:107475742 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1838 07 47718723 47729868 Dod07g1838 07 47718723 47729868 ECH