Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1777 ATGCGAACGGGGGAAAGTTTTGAGGGCCATATTGAGATCAATTCTCAAAGTTTGGGAGATGGTGACAGCAATGCGCTAATCATGCCAGCTAAGAGGATGAAGAAAAGGAAGGGGAAAGACAAGGAACATGGAAAAGTTGCATCAAGTAAGAAACAAAAGTTGAGCAAACCTCAGAAAAAGAAGCTGAAGAAGTTGGAGAATGATAAGGAGAAACAACTTCTCATGGTAAAAAGCATTGAGACATTAAAAGAGAACTCACTTCCAGAGTTTGCGTATCCACTTCTGCAACCTTCATGGAATATCAATCGGGCTGAGACTTTGCAGGAAAAACGTAGGAGAGCTGTACATTTATTAAAACAAGGATTGGAGGTTCCACAGAGTGATGATGAGATGCTTAAGAAACCAGATTTTTCACATAGAATTGAACCTGAGGCAGAAGAGATTCATTTGGCACAGGAAGATGAGGGGAATGACCTCATTCAATTTCAACCAGTTCAAACAGAGAGAGAAATCTTAAATCCAACGTCTGATCCATTGCTATCCTCTCTAGAATCAATCCGTGGGAATGAATCTATTGCTAAACCTCTAGTCAAAATTTCCATTGAGAAGCAAGCTGATGAAATCAGAAGTTCTCCTGCTGTGTCTTGTTCTAATGATGAGATAAAAGGCTCAAAGTCAAAGGATAGAACAGATGAAAACCCAAACACAATCAATGGATTGAGCAACCTTCCAGATCTATTTGCTCAAAGGCCTTCAACTACCCCTACTGTTGTGCATGTATACAGACCAAATGAGGTTGAAGACAAAAGAAAGGATCTGCCAATAGTCATGATGGAGCAAGAGATAATGGAAGCTATACATTACCATTCTAGTGTAATCATATGCGGAGAAACTGGATGTGGTAAAACAACTCAAGTTCCTCAGTTTCTTTATGAAGCTGGCTATGGATCGAGCAAGTCCAATACTCACAATGGTATTATTGGGGTTACTCAACCACGTCGGGTGGCTGTTCTTGCTACAGCAAGGCGTGTGGCATATGAGCTTGGTCTTCATCTAGGAAAGGAGGTTGGCTTTCAAGTTAGATATGACAAGATGATTGGAGATAATTGTTCTATCAAGTTTATGACTGATGGAATTTTACTAAGAGAAGTTCAGAATGATATTTTGTTGAGGCGGTATTCTGTAATAATACTTGATGAGGCTCATGAGAGGAGTTTGAACACAGATATCCTGATTGGGATGCTCTCACGTGTAATTAAAACTCGTCAAATGCTTTATAATGAACAGCAGAAGATGATACGGTCAGGGGAAAATTTAAGTCCAGAAAAACTTGTTTTTCCATTAAAACTTGTGCTGATGAGTGCCACCTTGCGAGTACAGGACTTCACTTCTGGAAGATTATTCCCTACCCCTCCACCTGTGATAGAAGTTCCTACAAGGCAATTTCCAGTAACAGTGTACTTTGCTAAGAAAACAGAAATTACAGATTATGTTGGGGCAGCATATAAGAAGGTGTTGGCAATTCACAAGAGGTTGCCTCCTGGGGGCATACTTGTCTTTGTCACCGGGCAGAGGGAAGTAGAGGACTTGTGCAGGAAGCTACGCAAAGCTTCAAGGGAATTTGTCATGAAAAAGGTTAAAGGGCCTGTGGAAAGTGATGGGACGCTGGTCCCTGAAACAAATTCTGTTGAGGGAATAAATATTAATGAGATCAATGAAGCATTTGATATCCCTGGAAGTTCAGCTATCCAGCAAACTGATAGATTTAGTGGTTATGATGAAGATGAGAATGACGTAGGTGGGAATGAATCTGACTATTCTTATAATTCAGAATCAGAGAGTGATCTGGAATTCAGTGGTGATGATAATGTTGAGCATTCAGAGGACCAGAGTAATACTGTGAATGTCTTAGGACAGGAAGGAAGCCTTGCTTCTCTGAAGGCTGCTTTTGAAAACTTGTCTGAGAAAGCTCCATTAAACACCTTGGATGGGGAGCAGACTTCTGTGAATATAGAAGGTGGTTTAGACCAATCAAAAGTTTCCAGGGAGAAGAGCTCTAAAGAAAATGGTGGTCTTTCTCCTGGTGCACTCTTTGTTCTTCCTCTTTATGCCATGCTGCCAGCAGCAGCCCAACTTCGCATTTTTGAAGCAGTCAAGGAGGGAGAGCGGCTTGTTATTGTTTCCACAAATGTTGCTGAAACCTCTTTAACAATCCCAGGGATAAAGTATGTGGTTGATACTGGAAGGGAAAAAGTGAAGAATTATGACTCCTCTAACGGCATGGAAACATATGAAGTACAATGGATTAGTAAGGCATCTGCTGCTCAACGTGCGGGCAGAGCAGGGAGAACTGGACCTGGACACTGTTACCGTCTCTATTCATCTGCAGCCTTTAGTAATGAATGTCCTGAGTACTCTCCTGCTGAAGTTGAGAAAGTACCTGTTCATGGCATTGTCCTCCTCTTAAAATCCATGCACATTAAGAAGGTTGCAAACTTCCCATTTCCTACTTCTCTTAAGGCTGCTTCCCTGCTTGAAGCTGAGAATTGCTTGAAAGCTCTAGAAGCACTTGATAGCAAGGACGAACTAACACCTTTGGGAAAATCCATGGCACTTTATCCATTGAGTCCTCGTCACTCTAGAATGCTTCTCAGTGTTATTAAAAGTACAAGGCACGAGCATAAACGCAATCCGAGTCTCCTTTTAGCATATGCTGTTGCAGCTGCTGCAGCATTGAGCTTGTCAAATCCTTTTATAATGCAATATGAAAGAAATGATAGCAGCAAAGACTCAGAGATGTACGGTAAACCTGGCATGGGGAACATTGAAAAATACCTTGATAAGAAAGAGAAGTTGAGGAGAAAGAAACTGAAAGAAACTGCTAAACTTGCACGTGAAAAATTTCGCGTTGTCACTAGTGATGCCCTGACTATAGCGTATGCCTTGCAATGTTTTGAACGTTCACAAAACTCAGAAGAATTCTGTGATGCGAATGCACTGCACTTCAAAACCATGGAGGAAATGTCGAAACTTAGACAACAGTTACTTAAGCTGGTCTTTTACCACAGTACTAAAGGTGGTTTTGAAGAATACTCTTGGATTTATGGAACTCTGGAGGATGTAGAACATGCTTGGCAGGTTCCTTCTGAAAAGTATCCTCTTTCCCTAGATGAGGAAAGGTTCGTTTGTCAGGCAATATGTGCTGGCTGGGCAGATAGGGTTGCCAAACGTATTACTACTTCTTCTAGGGCCTCTGACGGAGAGAAAAGGTCTAATGCTGTTAGGTATCAATCATGCATGGTTGAAGAAAATGTTTTCCTTCATCGTTGGTCAGCAGTTTCGATTGTAGCCCCTGAGTTTTTGGTTTACAATGAACTACTAGAGACAAAAAGACCAAACAAAGAAGGGATAACAAGTGCCAAGAGAGCATACATGCATGGAGTAACGAGTGTGGAGCCTGCTTGGCTTGTTGAGCATGCCAAATCTTCATGCATCTTCTCTCCACCCCAGATGGATCCCAGACCTTTCTACGATGCCCAGACTGACCAAGTAAAATGTTGGGTCATCCCAAGCTTTGGACGTTTCTGTTGGGAGCTTCCGAAGCATTCATTGCCTATTAGCAGTGATGATTATCGCGTGCAAGTGTTTGCGTATGCTTTGCTTGATGGTCAGGTTTGTCCATGTCTGAAATCTGTAAGGAAATACATGTCAGCCTCTCCGGAAAGTATTATGAAGAGAGAAGCATTGGGTCAAAAAAGGGTGGGGAATCTTTTAAGCAAGTTAAGGAGCAGGCTGATTGATAGCTCTGCTATGTTAAGAATGGTTTGGAAGGAGAATCCAAAGGAATTATTTTCAGAAATTTGGGATTGGTTTCAACAGTTTTCTCACAAACGCTTTAAAAAGTTATGGTTACAAATGCTTAGTGAAGTGCTTCTGGAGACACAAGAACACCCTGTGCGTACGAGCTCCAAAAAAGGTTGA 3981 0.4165 MRTGESFEGHIEINSQSLGDGDSNALIMPAKRMKKRKGKDKEHGKVASSKKQKLSKPQKKKLKKLENDKEKQLLMVKSIETLKENSLPEFAYPLLQPSWNINRAETLQEKRRRAVHLLKQGLEVPQSDDEMLKKPDFSHRIEPEAEEIHLAQEDEGNDLIQFQPVQTEREILNPTSDPLLSSLESIRGNESIAKPLVKISIEKQADEIRSSPAVSCSNDEIKGSKSKDRTDENPNTINGLSNLPDLFAQRPSTTPTVVHVYRPNEVEDKRKDLPIVMMEQEIMEAIHYHSSVIICGETGCGKTTQVPQFLYEAGYGSSKSNTHNGIIGVTQPRRVAVLATARRVAYELGLHLGKEVGFQVRYDKMIGDNCSIKFMTDGILLREVQNDILLRRYSVIILDEAHERSLNTDILIGMLSRVIKTRQMLYNEQQKMIRSGENLSPEKLVFPLKLVLMSATLRVQDFTSGRLFPTPPPVIEVPTRQFPVTVYFAKKTEITDYVGAAYKKVLAIHKRLPPGGILVFVTGQREVEDLCRKLRKASREFVMKKVKGPVESDGTLVPETNSVEGININEINEAFDIPGSSAIQQTDRFSGYDEDENDVGGNESDYSYNSESESDLEFSGDDNVEHSEDQSNTVNVLGQEGSLASLKAAFENLSEKAPLNTLDGEQTSVNIEGGLDQSKVSREKSSKENGGLSPGALFVLPLYAMLPAAAQLRIFEAVKEGERLVIVSTNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAAFSNECPEYSPAEVEKVPVHGIVLLLKSMHIKKVANFPFPTSLKAASLLEAENCLKALEALDSKDELTPLGKSMALYPLSPRHSRMLLSVIKSTRHEHKRNPSLLLAYAVAAAAALSLSNPFIMQYERNDSSKDSEMYGKPGMGNIEKYLDKKEKLRRKKLKETAKLAREKFRVVTSDALTIAYALQCFERSQNSEEFCDANALHFKTMEEMSKLRQQLLKLVFYHSTKGGFEEYSWIYGTLEDVEHAWQVPSEKYPLSLDEERFVCQAICAGWADRVAKRITTSSRASDGEKRSNAVRYQSCMVEENVFLHRWSAVSIVAPEFLVYNELLETKRPNKEGITSAKRAYMHGVTSVEPAWLVEHAKSSCIFSPPQMDPRPFYDAQTDQVKCWVIPSFGRFCWELPKHSLPISSDDYRVQVFAYALLDGQVCPCLKSVRKYMSASPESIMKREALGQKRVGNLLSKLRSRLIDSSAMLRMVWKENPKELFSEIWDWFQQFSHKRFKKLWLQMLSEVLLETQEHPVRTSSKKG* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1777 1326 Pfam DEAD/DEAH box helicase 280 461 IPR011545 GO:0003676|GO:0005524
Dod07g1777 1326 MobiDBLite consensus disorder prediction 1 67 - -
Dod07g1777 1326 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 394 403 IPR002464 -
Dod07g1777 1326 Coils Coil 942 962 - -
Dod07g1777 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 888 IPR027417 -
Dod07g1777 1326 MobiDBLite consensus disorder prediction 659 675 - -
Dod07g1777 1326 CDD DEXHc_DHX37 273 477 - -
Dod07g1777 1326 PANTHER ATP-DEPENDENT RNA HELICASE 254 1316 - -
Dod07g1777 1326 MobiDBLite consensus disorder prediction 658 690 - -
Dod07g1777 1326 Gene3D - 836 1019 - -
Dod07g1777 1326 Pfam Helicase associated domain (HA2) 847 977 IPR007502 GO:0004386
Dod07g1777 1326 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 283 475 IPR014001 -
Dod07g1777 1326 Coils Coil 62 82 - -
Dod07g1777 1326 Gene3D - 481 560 IPR027417 -
Dod07g1777 1326 Gene3D - 645 805 IPR027417 -
Dod07g1777 1326 SMART ha2_5 846 979 IPR007502 GO:0004386
Dod07g1777 1326 SMART helicmild6 678 785 IPR001650 -
Dod07g1777 1326 MobiDBLite consensus disorder prediction 208 248 - -
Dod07g1777 1326 Pfam Helicase conserved C-terminal domain 697 785 IPR001650 -
Dod07g1777 1326 MobiDBLite consensus disorder prediction 591 631 - -
Dod07g1777 1326 Gene3D - 237 480 IPR027417 -
Dod07g1777 1326 PANTHER ATP-DEPENDENT RNA HELICASE 21 128 - -
Dod07g1777 1326 MobiDBLite consensus disorder prediction 233 248 - -
Dod07g1777 1326 CDD SF2_C_RHA 687 793 - -
Dod07g1777 1326 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1063 1161 IPR011709 -
Dod07g1777 1326 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 645 826 IPR001650 -
Dod07g1777 1326 PANTHER - 21 128 - -
Dod07g1777 1326 PANTHER - 254 1316 - -
Dod07g1777 1326 SMART ultradead3 271 487 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1777 Dod-Chr7 46651151 46658637 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1777 K14780 - gmx:100788201 1921.36