Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1744 ATGGCTTCTCTATCAACATTTTGGCGCCTAAATCTGCTCCCGAAGCCTTCCCTCTTCTTCAAAGCAGCACTCTCCAATTTCCCATTCTCCCTCACTGCTTCTTCTTTCCGCACCATCTTCTCCCTAACATGCTCTTCTTCTTCTTCTTCTTCTTCTAACCCTCCCATCTCCGAAACGGAGCATCGCAACCGACCCCCTAAACGCCACGCCGACTTCGTCGTTTTGGGCATCGAAACCAGCTGCGACGACACCGCCGCCGCCGTCGTGAGAAGCAACGGTGAGATTCTGAGTCAAGTGGTGTCTTCTCAGGCAGATCTGCTTGCAAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAAGCTCACTCACAGGTGATTGACCAGGTTGTTCAAGAAACACTTGATAAAGCTTACATGACTGAGAAGGATCTTACTGCAGTTGCTGTTACTATTGGTCCTGGTTTAAGTCTTTGTCTTCGTGTGGGGGTGCAGAAAGCTCGTAAAATTGCTGGGGTCTTTAATTTACCAATTATTGGCATACATCACATGGAAGCGCATGCTTTAGTAGCCAGGTTAATTGAGAAAGATTTGCAGTTTCCATTCATGGCCCTACTTATTTCAGGGGGACATAATCTACTCATTCTTGCACGTGATCTTGGGCAATACATACAACTTGGAACCACAATAGATGATGCGATTGGTGAGGCATATGACAAGACCGCAAAATGGCTAGGACTTGATATGAGGAGAAGTGGTGGTCCTGCTATAGAGGAGCTCGCGAGGGAGGGTAATGCTGAATCAGTTAATTTTTCAATTCCAATGAAGCAGCACAAAGATTGCAACTTCTCCTATGCCGGTCTAAAAACCCAAGTAAGGCTGGCAATTGAATCCAAAAAGATTGATGCCAAGATTCCTATCTCTTCTGCAAGTAATGAAGATCGATTGTCACGGGCTGATATTGCTGCTTCTTTTCAGCGAATTGCAGTGTTACATCTTGAAGAAAGATGTGAACGAGCAATCCAGTGGGCATTGAAGATGGAGCCTTCTATAAGACACCTGGTTGTCTCTGGTGGTGTTGCATCAAATCAATATGTTAGAGCCCGGCTTGATATGGTTGTGAAGAAGAATGGCCTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTTGCTTGGACTGGCATTGAGCACTTCCGCATGGGAAGATATGACCCTCCTCCACCTGCAGAAGAACCAGAAGACTTTGTGTATGATTTGCGCCCGAGGTGGCCATTGGGTGAAGAATATGCTGAAGGAAAAAGTGAAGCGCGCTCGATAAGAAGGGCCCGGGTTCATCCGTCTCTCACTTCTCTGATTCAAGCATCATTGCAACAGTGA 1392 0.4655 MASLSTFWRLNLLPKPSLFFKAALSNFPFSLTASSFRTIFSLTCSSSSSSSSNPPISETEHRNRPPKRHADFVVLGIETSCDDTAAAVVRSNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSQVIDQVVQETLDKAYMTEKDLTAVAVTIGPGLSLCLRVGVQKARKIAGVFNLPIIGIHHMEAHALVARLIEKDLQFPFMALLISGGHNLLILARDLGQYIQLGTTIDDAIGEAYDKTAKWLGLDMRRSGGPAIEELAREGNAESVNFSIPMKQHKDCNFSYAGLKTQVRLAIESKKIDAKIPISSASNEDRLSRADIAASFQRIAVLHLEERCERAIQWALKMEPSIRHLVVSGGVASNQYVRARLDMVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRMGRYDPPPPAEEPEDFVYDLRPRWPLGEEYAEGKSEARSIRRARVHPSLTSLIQASLQQ* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1744 463 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 72 430 IPR022450 GO:0002949
Dod07g1744 463 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 168 187 IPR017861 -
Dod07g1744 463 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 225 246 IPR017861 -
Dod07g1744 463 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 202 214 IPR017861 -
Dod07g1744 463 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 88 IPR017861 -
Dod07g1744 463 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 353 362 IPR017861 -
Dod07g1744 463 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 147 167 IPR017861 -
Dod07g1744 463 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 74 403 IPR022450 GO:0002949
Dod07g1744 463 MobiDBLite consensus disorder prediction 45 65 - -
Dod07g1744 463 MobiDBLite consensus disorder prediction 45 59 - -
Dod07g1744 463 SUPERFAMILY Actin-like ATPase domain 74 397 IPR043129 -
Dod07g1744 463 Gene3D - 200 383 - -
Dod07g1744 463 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 94 397 IPR000905 -
Dod07g1744 463 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 69 442 IPR022450 GO:0002949
Dod07g1744 463 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 69 442 IPR000905 -
Dod07g1744 463 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 75 396 IPR017861 -
Dod07g1744 463 Gene3D - 74 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1744 Dod-Chr7 46094709 46100266 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1744 K01409 - gmx:100784367 734.947